RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 Q96M85 177 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 DERL3Q96Q80 235 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 CITED4Q96RK1 184 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 MCOLN1Q9GZU1 580 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 ADGRL4Q9HBW9 690 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 RPRD1BQ9NQG5 326 aaKnown RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 PRTFDC1Q9NRG1 225 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 NUDT15Q9NV35 164 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 SLC35A3Q9Y2D2 325 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 TRBV2A0A0J9YWF9 115 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 OIP5O43482 229 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 KCNJ13O60928 360 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 EDNRAP25101 427 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 ITPKBP27987 946 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 CCR6P51684 374 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 HTR4Q13639 388 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 CCDC92Q53HC0 331 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 PRAMEF8Q5VWM4 474 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 PRAMEF7Q5VXH5 474 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 SFXN4Q6P4A7 337 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 MZT2AQ6P582 158 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 MRGPREQ86SM8 312 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 GID4Q8IVV7 300 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 RDH10Q8IZV5 341 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 SCARF2Q96GP6 870 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 DGAT2Q96PD7 388 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 SLC38A3Q99624 504 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 THAP7Q9BT49 309 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 MCCC2Q9HCC0 563 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 TRPV5Q9NQA5 729 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 INMT-MINDY4F8WBC2 141 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 IGHA1P01876 353 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 HK1P19367 917 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 EVI2BP34910 448 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 ASAH1Q13510 395 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 RTL4Q6ZR62 310 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 UBE2Q1Q7Z7E8 422 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 THAP3Q8WTV1 239 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 SPRTNQ9H040 489 aaPredicted RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 CDCP1Q9H5V8 836 aa15.29■□□□□ 0.04
VPS54-201ENST00000272322 MRPS18AQ9NVS2 196 aaKnown RBP15.29■□□□□ 0.04
VPS54-201ENST00000272322 C11orf98E9PRG8 122 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 FZD2Q14332 565 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 ADOQ96SZ5 270 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 KCNN2Q9H2S1 579 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 DNAJB12Q9NXW2 375 aaKnown RBP15.28■□□□□ 0.04
VPS54-201ENST00000272322 ZNF222Q9UK12 451 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 EXOGQ9Y2C4 368 aaKnown RBP15.28■□□□□ 0.04
VPS54-201ENST00000272322 MUC22E2RYF6 1773 aaPredicted RBP15.28■□□□□ 0.04
VPS54-201ENST00000272322 OR5K3A6NET4 321 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 SLC22A31A6NKX4 558 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 ADRB1P08588 477 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 ACAA2P42765 397 aaKnown RBP15.28■□□□□ 0.04
VPS54-201ENST00000272322 GALEQ14376 348 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 C1orf189Q5VU69 101 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 OR52N1Q8NH53 320 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 THAP4Q8WY91 577 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 TSPAN10Q9H1Z9 355 aaPredicted RBP15.28■□□□□ 0.04
VPS54-201ENST00000272322 ERVMER34-1Q9H9K5 563 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 COPS3Q9UNS2 423 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 TMA7Q9Y2S6 64 aaKnown RBP15.28■□□□□ 0.04
VPS54-201ENST00000272322 TICRRQ7Z2Z1 1910 aa15.28■□□□□ 0.04
VPS54-201ENST00000272322 C2orf72A6NCS6 295 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 TOXO94900 526 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 VASH1Q7L8A9 365 aaPredicted RBP15.27■□□□□ 0.04
VPS54-201ENST00000272322 SETD6Q8TBK2 473 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 BRIX1Q8TDN6 353 aaKnown RBP15.27■□□□□ 0.04
VPS54-201ENST00000272322 PMEPA1Q969W9 287 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 SLC25A36Q96CQ1 311 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 S1PR5Q9H228 398 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 HSPB11Q9Y547 144 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 A0A0B4J2E0 115 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 A0A1B0GX12 115 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 C2CD4DB7Z1M9 353 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 GPR176Q14439 515 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 GARNL3Q5VVW2 1013 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 SFRP4Q6FHJ7 346 aaPredicted RBP15.27■□□□□ 0.04
VPS54-201ENST00000272322 FAAP20Q6NZ36 180 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 MZT2BQ6NZ67 158 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 C16orf47Q6ZP98 133 aaPredicted RBP15.27■□□□□ 0.04
VPS54-201ENST00000272322 DNAAF1Q8NEP3 725 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 TSLPQ969D9 159 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 KLHDC7BQ96G42 594 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 COQ7Q99807 217 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 MESP1Q9BRJ9 268 aa15.27■□□□□ 0.04
VPS54-201ENST00000272322 RBFOX1Q9NWB1 397 aaKnown RBP15.27■□□□□ 0.04
VPS54-201ENST00000272322 TEX13CA0A0J9YWL9 993 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 OR6C68A6NDL8 312 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 HMX3A6NHT5 357 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 LYPD3O95274 346 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 THBS1P07996 1170 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 DGCR2P98153 550 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 ADAM15Q13444 863 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 CD200R1LQ6Q8B3 271 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 ASCC1Q8N9N2 400 aaKnown RBP15.27■□□□□ 0.03
VPS54-201ENST00000272322 ZNF524Q96C55 264 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 TMEM43Q9BTV4 400 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 Q9N2J8 555 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 SLC6A5Q9Y345 797 aa15.27■□□□□ 0.03
VPS54-201ENST00000272322 NOX1Q9Y5S8 564 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms