RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 MCCC2Q9HCC0 563 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 PSORS1C1Q9UIG5 152 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 ZNF337Q9Y3M9 751 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 TRAV27A0A087WT01 109 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 TMED7-TICAM2A0A0A6YYA0 188 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 BHLHE40O14503 412 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 CH25HO95992 272 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 LIFP15018 202 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 AIMP2Q13155 320 aaKnown RBP12.81□□□□□ -0.36
SS18-201ENST00000269137 TGIF1Q15583 401 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 ZNF74Q16587 644 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 MEDAGQ5VYS4 303 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 C5orf46Q6UWT4 87 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 SIRT6Q8N6T7 355 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 ZNF540Q8NDQ6 660 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 OR2M3Q8NG83 312 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 OR51A7Q8NH64 312 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 TMEM163Q8TC26 289 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 STK35Q8TDR2 534 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 FKBP14Q9NWM8 211 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 BAIAP2Q9UQB8 552 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 TMED7Q9Y3B3 224 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 HRH3Q9Y5N1 445 aa12.81□□□□□ -0.36
SS18-201ENST00000269137 EML6Q6ZMW3 1958 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 TRAV36DV7A0A075B6V5 113 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 CLCA1A8K7I4 914 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 SURF4O15260 269 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 TLX2O43763 284 aaPredicted RBP12.8□□□□□ -0.36
SS18-201ENST00000269137 NPIPB7O75200 414 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 ENTPD6O75354 484 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 CCL3P10147 92 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 GRK5P34947 590 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 APOBEC1P41238 236 aaKnown RBP12.8□□□□□ -0.36
SS18-201ENST00000269137 MAP2K6P52564 334 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 RPS4XP62701 263 aaKnown RBP12.8□□□□□ -0.36
SS18-201ENST00000269137 ANKDD1AQ495B1 522 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 ZNF468Q5VIY5 522 aaPredicted RBP12.8□□□□□ -0.36
SS18-201ENST00000269137 B3GNTL1Q67FW5 361 aaPredicted RBP12.8□□□□□ -0.36
SS18-201ENST00000269137 ARSKQ6UWY0 536 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 THSD4Q6ZMP0 1018 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 SPARTQ8N0X7 666 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 WDSUB1Q8N9V3 476 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 SIGLEC11Q96RL6 698 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 ENKD1Q9H0I2 346 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 PROK2Q9HC23 129 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 TEKT2Q9UIF3 430 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 PCDHGB1Q9Y5G3 927 aa12.8□□□□□ -0.36
SS18-201ENST00000269137 MED13Q9UHV7 2174 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 A8MVM7 634 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 AHCYL1O43865 530 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 SUSD5O60279 629 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 NDUFB2O95178 105 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 WISP1O95388 367 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 SLC6A6P31641 620 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 PEX19P40855 299 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 ZNF41P51814 821 aaPredicted RBP12.79□□□□□ -0.36
SS18-201ENST00000269137 PLPPR5Q32ZL2 321 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 SYT14P1Q58G82 188 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 PRAMEF20Q5VT98 475 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 KCTD8Q6ZWB6 473 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 PLCZ1Q86YW0 608 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 CYP4Z2PQ8N1L4 340 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 LRRC17Q8N6Y2 441 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 GGHQ92820 318 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 KTI12Q96EK9 354 aaPredicted RBP12.79□□□□□ -0.36
SS18-201ENST00000269137 MRGPRX4Q96LA9 322 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 LHPPQ9H008 270 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 NANSQ9NR45 359 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 CNOT2Q9NZN8 540 aaKnown RBP12.79□□□□□ -0.36
SS18-201ENST00000269137 IL20RAQ9UHF4 553 aa12.79□□□□□ -0.36
SS18-201ENST00000269137 TMEM72A0PK05 275 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 EFCAB10A6NFE3 127 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 LRRN3E7EW58 273 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 SNPHO15079 494 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 RGS10O43665 173 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 GFRA3O60609 400 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 SLC25A12O75746 678 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 SNX4O95219 450 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 ASAH2BP0C7U1 165 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 JUNBP17275 347 aaPredicted RBP12.78□□□□□ -0.36
SS18-201ENST00000269137 SLC15A1P46059 708 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 ST13P50502 369 aaKnown RBP12.78□□□□□ -0.36
SS18-201ENST00000269137 NUDT6P53370 316 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 PRPS1P60891 318 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 LTBQ06643 244 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 NADK2Q4G0N4 442 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 PRSS48Q7RTY5 328 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 BEST3Q8N1M1 668 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 OR4K17Q8NGC6 315 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 MYDGFQ969H8 173 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 TAAR8Q969N4 342 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 C1GALT1C1Q96EU7 318 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 LRR1Q96L50 414 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 IFT27Q9BW83 186 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 PTGES2Q9H7Z7 377 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 FKRPQ9H9S5 495 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 VCX3AQ9NNX9 186 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 AMBNQ9NP70 447 aa12.78□□□□□ -0.36
SS18-201ENST00000269137 STMN3Q9NZ72 180 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms