RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 HS6ST2Q96MM7 605 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 UBQLN3Q9H347 655 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 KRT84Q9NSB2 600 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 USE1Q9NZ43 259 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 BOKQ9UMX3 212 aaPredicted RBP8.8□□□□□ -1
SNRNP40-201ENST00000263694 MED31Q9Y3C7 131 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 ZNF337Q9Y3M9 751 aa8.8□□□□□ -1
SNRNP40-201ENST00000263694 OR2M5A3KFT3 312 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 ENO4A6NNW6 628 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 FAM47E-STBD1D6RA91 191 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 H3BML4 177 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 ETV2O00321 342 aaPredicted RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 GLSO94925 669 aaPredicted RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 SOX14O95416 240 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 TP53P04637 393 aaPredicted RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 ANXA8P13928 327 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 APOBEC1P41238 236 aaKnown RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 RBM34P42696 430 aaKnown RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 RPS5P46782 204 aaKnown RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 B3GALT5-AS1P59052 145 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 PPIAP62937 165 aaKnown RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 LTBQ06643 244 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 TMEM44Q2T9K0 475 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 PLEKHN1Q494U1 663 aaPredicted RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 GXYLT1Q4G148 440 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 C6orf52Q5T4I8 152 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 SWT1Q5T5J6 900 aaKnown RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 RAET1LQ5VY80 246 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 KIF18BQ86Y91 864 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 C10orf53Q8N6V4 93 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 TMEM178AQ8NBL3 297 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 GNPDA2Q8TDQ7 276 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 SNRNP27Q8WVK2 155 aaKnown RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 TAAR8Q969N4 342 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 BPIFA2Q96DR5 249 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 ARL5BQ96KC2 179 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 MRGPRX4Q96LA9 322 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 MOGAT1Q96PD6 335 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 MBOAT4Q96T53 435 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 PSD2Q9BQI7 771 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 DGCR6LQ9BY27 220 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 UCK2Q9BZX2 261 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 DEFB127Q9H1M4 99 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 TSPAN10Q9H1Z9 355 aaPredicted RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 VCX3BQ9H321 246 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 TOR3AQ9H497 397 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 RIBC2Q9H4K1 309 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 ZNF703Q9H7S9 590 aaPredicted RBP8.79□□□□□ -1
SNRNP40-201ENST00000263694 REV1Q9UBZ9 1251 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 CHRNA9Q9UGM1 479 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 IL20RAQ9UHF4 553 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 MGAT4BQ9UQ53 548 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 SLC6A5Q9Y345 797 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 ATMQ13315 3056 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 SVILO95425 2214 aa8.79□□□□□ -1
SNRNP40-201ENST00000263694 A0A087WZY1 265 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 TRAV17A0A0B4J275 112 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 A0A1W2PNR3 127 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ARRDC5A6NEK1 342 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 H0YC42 278 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 CDK2AP1O14519 115 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ZNHIT1O43257 154 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 KLF4O43474 513 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 CLIC3O95833 236 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 HPRP00739 348 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ITGB2P05107 769 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 TFPIP10646 304 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 POU1F1P28069 291 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 SRD5A2P31213 254 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 SFTPDP35247 375 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 HTR3AP46098 478 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 GSSP48637 474 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 STARP49675 285 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 TPD52P55327 224 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 DLX5P56178 289 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 GK3PQ14409 553 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ZNF169Q14929 603 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 TMEM176BQ3YBM2 270 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 TMEM236Q5W0B7 351 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ASB18Q6ZVZ8 466 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 RNF113BQ8IZP6 322 aaKnown RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 GTPBP8Q8N3Z3 284 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 PACRGLQ8N7B6 248 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 KDF1Q8NAX2 398 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 ZFP62Q8NB50 900 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 OR13C2Q8NGS9 318 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 CYGBQ8WWM9 190 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 SMPDL3BQ92485 455 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ZBTB8AQ96BR9 441 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 SLC25A36Q96CQ1 311 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 SGTBQ96EQ0 304 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ZNF184Q99676 751 aaPredicted RBP8.78□□□□□ -1
SNRNP40-201ENST00000263694 TMEM43Q9BTV4 400 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ENKD1Q9H0I2 346 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 SLC6A15Q9H2J7 730 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 VCXQ9H320 206 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 EGLN3Q9H6Z9 239 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 ZNF556Q9HAH1 456 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 C12orf10Q9HB07 376 aa8.78□□□□□ -1
SNRNP40-201ENST00000263694 PAPOLBQ9NRJ5 636 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms