RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 AGR2O95994 175 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 NPR2P20594 1047 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 RBMS1P29558 406 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 IGFALSP35858 605 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 IGSF11Q5DX21 431 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 FBXO42Q6P3S6 717 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 FIGLAQ6QHK4 219 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 MRGPREQ86SM8 312 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 OR11H4Q8NGC9 324 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 C1orf216Q8TAB5 229 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 OR2M4Q96R27 311 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 LMAN2LQ9H0V9 348 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 ANKRD19PQ9H560 264 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 METTL17Q9H7H0 456 aaPredicted RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 ARHGEF17Q96PE2 2063 aaPredicted RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 TRIOO75962 3097 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 A0A1B0GWA3 101 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 URADA6NGE7 173 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 TEX46H3BTG2 121 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 NUPL2O15504 423 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 SEC14L5O43304 696 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 GATBO75879 557 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 HSD17B12Q53GQ0 312 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 KIAA1324Q6UXG2 1013 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 OR4N2Q8NGD1 307 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 C1QTNF7Q9BXJ2 289 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 IL23AQ9NPF7 189 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 CMC2Q9NRP2 79 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 MRPL39Q9NYK5 338 aaKnown RBP11.68□□□□□ -0.54
LIG1-201ENST00000263274 KCNE5Q9UJ90 142 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 OR10H1Q9Y4A9 318 aa11.68□□□□□ -0.54
LIG1-201ENST00000263274 BHLHE40O14503 412 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 NDUFS1P28331 727 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 MNX1P50219 401 aaPredicted RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 RPS15AP62244 130 aaKnown RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 TNK1Q13470 666 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ERV3-1Q14264 604 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 PON3Q15166 354 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ARHGAP11BQ3KRB8 267 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ALKBH2Q6NS38 261 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 LNX2Q8N448 690 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 C9orf62Q8N4C0 152 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 FTMTQ8N4E7 242 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ZNF680Q8NEM1 530 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 NMNAT3Q96T66 252 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 RANBP3Q9H6Z4 567 aaPredicted RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 ERVMER34-1Q9H9K5 563 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 MEPEQ9NQ76 525 aaPredicted RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 ZNF346Q9UL40 294 aaKnown RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 DAPP1Q9UN19 280 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 SIGLEC7Q9Y286 467 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 TRABD2BA6NFA1 517 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 HLA-DQB1P01920 261 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 WNT1P04628 370 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 FAM157BP0CG42 384 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 NID1P14543 1247 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 HIST1H1CP16403 213 aaKnown RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 NAGAP17050 411 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 SLC6A6P31641 620 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 GDNFP39905 211 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 TSPAN5P62079 268 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 OC90Q02509 493 aaPredicted RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 ZNF85Q03923 595 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 PLA1AQ53H76 456 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 PRAMEF8Q5VWM4 474 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 PRAMEF7Q5VXH5 474 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 RTL4Q6ZR62 310 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 TRILQ7L0X0 811 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 SFTPA2Q8IWL1 248 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ZNF687Q8N1G0 1237 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 MEIOBQ8N635 442 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 METTL27Q8N6F8 245 aaPredicted RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 SIPA1Q96FS4 1042 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 TIMM29Q9BSF4 260 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 IKZF2Q9UKS7 526 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 PRSS38A1L453 326 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 SELENOFO60613 162 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ARL6IP5O75915 188 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ANKRD34CP0C6C1 535 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ZNF10P21506 573 aaPredicted RBP11.67□□□□□ -0.54
LIG1-201ENST00000263274 C5AR1P21730 350 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 DUSP8Q13202 625 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 FZD5Q13467 585 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ST3GAL2Q16842 350 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 GAB4Q2WGN9 574 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 FCRLAQ7L513 359 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 TMEM52Q8NDY8 209 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 OR1E3Q8WZA6 343 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 KCMF1Q9P0J7 381 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 ZMIZ1Q9ULJ6 1067 aa11.67□□□□□ -0.54
LIG1-201ENST00000263274 SHOXO15266 292 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 SLC22A5O76082 557 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 ADRB1P08588 477 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 CT62P0C5K7 136 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 LINC00271P0C7V0 271 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 VEGFCP49767 419 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 ERVK-25P63136 954 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 MS4A15Q8N5U1 240 aa11.66□□□□□ -0.54
LIG1-201ENST00000263274 OR52R1Q8NGF1 315 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms