RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 L7N2F9 121 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 SBK2P0C263 348 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 HK1P19367 917 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 FPR3P25089 353 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ZNF234Q14588 700 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 DEFB110Q30KQ9 67 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 MBOAT2Q6ZWT7 520 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 METTL3Q86U44 580 aaKnown RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 OR10AC1Q8NH08 325 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 PATE1Q8WXA2 126 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ST8SIA4Q92187 359 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 PRSS27Q9BQR3 290 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ADAT1Q9BUB4 502 aaKnown RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 SPATA5L1Q9BVQ7 753 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ARL6Q9H0F7 186 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 RANBP3Q9H6Z4 567 aaPredicted RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 ERVMER34-1Q9H9K5 563 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ADGRL4Q9HBW9 690 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 TMEM138Q9NPI0 162 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 SDHAF2Q9NX18 166 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 MOKQ9UQ07 419 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 TVP23AA6NH52 213 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 SLC9A3R1O14745 358 aaPredicted RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 EPXP11678 715 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 HIST1H1CP16403 213 aaKnown RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 NT5EP21589 574 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 MTNR1BP49286 362 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 DCAF12L2Q5VW00 463 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 MTSS1LQ765P7 747 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 TMEM52Q8NDY8 209 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 C1orf216Q8TAB5 229 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 MENTQ9BUN1 341 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 TEX12Q9BXU0 123 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 TMEM168Q9H0V1 697 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 NFKBIL1Q9UBC1 381 aaPredicted RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 ZNF106Q9H2Y7 1883 aaKnown RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 A0A0G2JPF8 293 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 HNRNPCL3B7ZW38 293 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 SHOXO15266 292 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 FLRT2O43155 660 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 HNRNPCL4P0DMR1 293 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 VASPP50552 380 aaPredicted RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 ZNF136P52737 540 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 PRDX1Q06830 199 aaKnown RBP11.98□□□□□ -0.49
SNX1-201ENST00000261889 LIX1LQ8IVB5 337 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 OR52N1Q8NH53 320 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 OR4C6Q8NH72 309 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ZDHHC1Q8WTX9 485 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 SMARCD2Q92925 531 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 PELI1Q96FA3 418 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 HS6ST2Q96MM7 605 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 CAMK1GQ96NX5 476 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 LIN7BQ9HAP6 207 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 ASB6Q9NWX5 421 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 IER3IP1Q9Y5U9 82 aa11.98□□□□□ -0.49
SNX1-201ENST00000261889 TRIM77I1YAP6 450 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 EMC8O43402 210 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 IFNA7P01567 189 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 ADH5P11766 374 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 RBMS1P29558 406 aaKnown RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 PSMA6P60900 246 aaKnown RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 ERV3-1Q14264 604 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 DUSP6Q16828 381 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 DMRTC1Q5HYR2 192 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 PYHIN1Q6K0P9 492 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 C11orf88Q6PI97 169 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 ARSKQ6UWY0 536 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 METTL27Q8N6F8 245 aaPredicted RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 PPP1R14AQ96A00 147 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 CHST6Q9GZX3 395 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 HRASLSQ9HDD0 168 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 ACSS1Q9NUB1 689 aaPredicted RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 ZNF230Q9UIE0 474 aaPredicted RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 DMDP11532 3685 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 HRKO00198 91 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 BHLHE40O14503 412 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 P2RX6O15547 441 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 OR8G3PP0DMU2 310 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 PEBP1P30086 187 aaKnown RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 GABRA3P34903 492 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 PPM1FP49593 454 aaPredicted RBP11.97□□□□□ -0.49
SNX1-201ENST00000261889 DEFA5Q01523 94 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 FAM53BQ14153 422 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 ELP2Q6IA86 826 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 LIN54Q6MZP7 749 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 CD300LDQ6UXZ3 194 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 C10orf53Q8N6V4 93 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 GALNT6Q8NCL4 622 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 CYYR1Q96J86 154 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 SARGQ9BW04 601 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 GSX2Q9BZM3 304 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 CD93Q9NPY3 652 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 C2orf42Q9NWW7 574 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 MAB21L2Q9Y586 359 aa11.97□□□□□ -0.49
SNX1-201ENST00000261889 C7orf66A4D0T2 115 aa11.96□□□□□ -0.49
SNX1-201ENST00000261889 ANXA2P2A6NMY6 339 aa11.96□□□□□ -0.49
SNX1-201ENST00000261889 CBX7O95931 251 aa11.96□□□□□ -0.49
SNX1-201ENST00000261889 CCR4P51679 360 aa11.96□□□□□ -0.49
SNX1-201ENST00000261889 SLC48A1Q6P1K1 146 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms