RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 DAPK2Q9UIK4 370 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ICAM5Q9UMF0 924 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 SIGLEC7Q9Y286 467 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 EP300Q09472 2414 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-201ENST00000254816 SH3D21A4FU49 640 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ELOA3DA6NLF2 546 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-201ENST00000254816 SOCS6O14544 535 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 MED22Q15528 200 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 PGGHGQ32M88 737 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ELOA3BQ3SY89 546 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 TMEM201Q5SNT2 666 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 STPG1Q5TH74 334 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 POMZP3Q6PJE2 187 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 MRGPREQ86SM8 312 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ATG4DQ86TL0 474 aaPredicted RBP17.23■□□□□ 0.35
TRIM47-201ENST00000254816 LRRC17Q8N6Y2 441 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 ELOA3Q8NG57 546 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 OR11G2Q8NGC1 345 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 FGF11Q92914 225 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 HGDQ93099 445 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 IMMP1LQ96LU5 166 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 TNFRSF13CQ96RJ3 184 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 SPRY4Q9C004 299 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 UBQLN3Q9H347 655 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 PCDHGA1Q9Y5H4 931 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 KNTC1P50748 2209 aa17.23■□□□□ 0.35
TRIM47-201ENST00000254816 IGKV1D-42A0A075B6H8 117 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 EFR3AQ14156 821 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 SYT14P1Q58G82 188 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 OAFQ86UD1 273 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 MARCH9Q86YJ5 346 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 CLDN22Q8N7P3 220 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 OR2T33Q8NG76 320 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 BRIX1Q8TDN6 353 aaKnown RBP17.22■□□□□ 0.35
TRIM47-201ENST00000254816 SLC38A2Q96QD8 506 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 CHCHD6Q9BRQ6 235 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 ZNF160Q9HCG1 818 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 TCFL5Q9UL49 500 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 FUOMA2VDF0 154 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 EFCAB10A6NFE3 127 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 SURF4O15260 269 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 TACR3P29371 465 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 OTX2P32243 289 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 RGS6P49758 472 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 OCLNQ16625 522 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 TRIM16LQ309B1 348 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 FCRLBQ6BAA4 426 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 LYPD8Q6UX82 237 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 FAM26EQ8N5C1 309 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 TMEM163Q8TC26 289 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 Q96MT0 163 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 CENPOQ9BU64 300 aa17.22■□□□□ 0.35
TRIM47-201ENST00000254816 EIF4E2O60573 245 aaKnown RBP17.21■□□□□ 0.35
TRIM47-201ENST00000254816 PTP4A3O75365 173 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 BMP7P18075 431 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 SLC1A3P43003 542 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 PSPHP78330 225 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 SLC35F1Q5T1Q4 408 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 SMARCD3Q6STE5 483 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 OR52L1Q8NGH7 329 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 SGTBQ96EQ0 304 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 DNAJA3Q96EY1 480 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 ZNF582Q96NG8 517 aaPredicted RBP17.21■□□□□ 0.35
TRIM47-201ENST00000254816 RASL10BQ96S79 203 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 PCSK5Q92824 1860 aa17.21■□□□□ 0.35
TRIM47-201ENST00000254816 B4DXG7 233 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 CDC40O60508 579 aaKnown RBP eCLIP17.21■□□□□ 0.34
TRIM47-201ENST00000254816 SLC15A1P46059 708 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 SLC6A8P48029 635 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 ZNF91Q05481 1191 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 DBPQ10586 325 aaPredicted RBP17.21■□□□□ 0.34
TRIM47-201ENST00000254816 FHL1Q13642 323 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 TSTQ16762 297 aaKnown RBP17.21■□□□□ 0.34
TRIM47-201ENST00000254816 GXYLT1Q4G148 440 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 PLAG1Q6DJT9 500 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 OR10G3Q8NGC4 313 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 OR5W2Q8NH69 310 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 TMCO6Q96DC7 493 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 LRFN3Q9BTN0 628 aa17.21■□□□□ 0.34
TRIM47-201ENST00000254816 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.34
TRIM47-201ENST00000254816 C6orf62Q9GZU0 229 aaPredicted RBP17.21■□□□□ 0.34
TRIM47-201ENST00000254816 NSG1A0A0A6YYJ2 146 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 SPAARA0A1B0GVQ0 90 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 BHLHE40O14503 412 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 RCBTB2O95199 551 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 P2RX1P51575 399 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 CBFBQ13951 182 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 LINC00299Q6ZSB3 139 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 USP43Q70EL4 1123 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 ZNF367Q7RTV3 350 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 CRELD1Q96HD1 420 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 IFT27Q9BW83 186 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 CDCA4Q9BXL8 241 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 MCCC2Q9HCC0 563 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 CNOT2Q9NZN8 540 aaKnown RBP17.2■□□□□ 0.34
TRIM47-201ENST00000254816 FARSAQ9Y285 508 aaKnown RBP17.2■□□□□ 0.34
TRIM47-201ENST00000254816 HRH3Q9Y5N1 445 aa17.2■□□□□ 0.34
TRIM47-201ENST00000254816 HCN1O60741 890 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 ITGA10O75578 1167 aa17.19■□□□□ 0.34
TRIM47-201ENST00000254816 PNMTP11086 282 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms