RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 RPS11P62280 158 aaKnown RBP eCLIP9.32□□□□□ -0.92
COPB1-201ENST00000249923 PSG6Q00889 435 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 SFXN4Q6P4A7 337 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 MZT2AQ6P582 158 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 METAP1DQ6UB28 335 aaPredicted RBP9.32□□□□□ -0.92
COPB1-201ENST00000249923 LYPD4Q6UWN0 246 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 LIX1LQ8IVB5 337 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 ARHGEF39Q8N4T4 335 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 SPERTQ8NA61 448 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 CD180Q99467 661 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 ORAI3Q9BRQ5 295 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 PBX4Q9BYU1 374 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 TTYH1Q9H313 450 aaPredicted RBP9.32□□□□□ -0.92
COPB1-201ENST00000249923 HCN3Q9P1Z3 774 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 ST6GALNAC2Q9UJ37 374 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 COLEC10Q9Y6Z7 277 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 A0A0B4J2E0 115 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 A0A1B0GX12 115 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 CHST10O43529 356 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 STX11O75558 287 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 PPP1R3DO95685 299 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 GALP22466 123 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 GZMKP49863 264 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 SLC25A25Q6KCM7 469 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 PRSS45Q7RTY3 260 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 HDDC2Q7Z4H3 204 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 ZNF761Q86XN6 746 aaPredicted RBP9.32□□□□□ -0.92
COPB1-201ENST00000249923 TOMM5Q8N4H5 51 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
COPB1-201ENST00000249923 ORAI1Q96D31 301 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 TNFRSF13CQ96RJ3 184 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 TEX12Q9BXU0 123 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 FN3KQ9H479 309 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 SAV1Q9H4B6 383 aaPredicted RBP9.32□□□□□ -0.92
COPB1-201ENST00000249923 PRDM9Q9NQV7 894 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 MUC3AQ02505 3323 aa9.32□□□□□ -0.92
COPB1-201ENST00000249923 MPDZO75970 2070 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 PRR32B1ATL7 298 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 EGFP01133 1207 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 HMGN1P05114 100 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ADRB1P08588 477 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 STOMP27105 288 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 RGS1Q08116 209 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 NDUFAF6Q330K2 333 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 GXYLT1Q4G148 440 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 FIGLAQ6QHK4 219 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ALKAL2Q6UX46 152 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 CFAP77Q6ZQR2 320 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 LINGO2Q7L985 606 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 OAFQ86UD1 273 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 GID4Q8IVV7 300 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 SLC22A18ASQ8N1D0 253 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 HOXB13Q92826 284 aaPredicted RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 ZNF524Q96C55 264 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 GINS4Q9BRT9 223 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 IFT27Q9BW83 186 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 SLC28A3Q9HAS3 691 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 DUSP22Q9NRW4 184 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ACTR10Q9NZ32 417 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 FXYD6-FXYD2A0A087WZ82 144 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 TEX13CA0A0J9YWL9 993 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 DAPL1A0PJW8 107 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 SLC9B1P1A6NJY1 282 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 GMFGO60234 142 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 KCNJ13O60928 360 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 APEHP13798 732 aaKnown RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 RPL35P42766 123 aaKnown RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 LGALS3BPQ08380 585 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 NFATC4Q14934 902 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ATXN7L3Q14CW9 347 aaPredicted RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 SF3A2Q15428 464 aaKnown RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 ALG11Q2TAA5 492 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ITPRIPL2Q3MIP1 535 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 DMKNQ6E0U4 476 aaPredicted RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 RANBP3LQ86VV4 465 aaPredicted RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 MEIOBQ8N635 442 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ABHD4Q8TB40 342 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ZFAND1Q8TCF1 268 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 CACNG6Q9BXT2 260 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 GSDMCQ9BYG8 508 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 FXYD6Q9H0Q3 95 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 OR10A4Q9H209 315 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 FAM60AQ9NP50 221 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 BRD7Q9NPI1 651 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 DNAJB12Q9NXW2 375 aaKnown RBP9.31□□□□□ -0.92
COPB1-201ENST00000249923 SLCO1C1Q9NYB5 712 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 KLHL21Q9UJP4 597 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 ADAM30Q9UKF2 790 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 SLCO1B1Q9Y6L6 691 aa9.31□□□□□ -0.92
COPB1-201ENST00000249923 A0A0A6YYJ9 748 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 B3GALT2O43825 422 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 RGS11O94810 467 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 DBIP07108 87 aaKnown RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 GABRA3P34903 492 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 KIAA1024LP59773 190 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 RRAS2P62070 204 aaPredicted RBP9.3□□□□□ -0.92
COPB1-201ENST00000249923 TNK1Q13470 666 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 STK11Q15831 433 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 CA13Q8N1Q1 262 aa9.3□□□□□ -0.92
COPB1-201ENST00000249923 COX18Q8N8Q8 333 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms