RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 GKN2Q86XP6 184 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 CLDN22Q8N7P3 220 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 IL17RDQ8NFM7 739 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 AGAP4Q96P64 663 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 LMF2Q9BU23 707 aaKnown RBP14.48□□□□□ -0.09
LRFN1-201ENST00000248668 PPIL3Q9H2H8 161 aaKnown RBP14.48□□□□□ -0.09
LRFN1-201ENST00000248668 IER3IP1Q9Y5U9 82 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 MCIDASD6RGH6 385 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 PRAMEF2O60811 474 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 HTR2BP41595 481 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 OR1D5P58170 312 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 TMEM91Q6ZNR0 172 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 C10orf53Q8N6V4 93 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 OR13C5Q8NGS8 318 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 C4orf36Q96KX1 117 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 TIMP4Q99727 224 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 KLHDC3Q9BQ90 382 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 RHPN2P1A8MT19 583 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 OIP5O43482 229 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 HIST1H1CP16403 213 aaKnown RBP14.48□□□□□ -0.09
LRFN1-201ENST00000248668 ARIH2OSQ8N7S6 290 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 C17orf47Q8NEP4 570 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 OR5H6Q8NGV6 325 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 CCDC32Q9BV29 185 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 PDE7BQ9NP56 450 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.48□□□□□ -0.09
LRFN1-201ENST00000248668 TEKT2Q9UIF3 430 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 TMEM5Q9Y2B1 443 aa14.48□□□□□ -0.09
LRFN1-201ENST00000248668 TRDV1A0A1B0GX56 115 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 FMO6PO60774 539 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 NSA2O95478 260 aaKnown RBP14.47□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF3P17036 446 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CD27P26842 260 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 GRPRP30550 384 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 P2RY14Q15391 338 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 TMEM44Q2T9K0 475 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF595Q8IYB9 648 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 AHCYL2Q96HN2 611 aaKnown RBP14.47□□□□□ -0.09
LRFN1-201ENST00000248668 PHF7Q9BWX1 381 aaPredicted RBP14.47□□□□□ -0.09
LRFN1-201ENST00000248668 TRIM2Q9C040 744 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 C14orf105Q9NVL8 296 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 BABAM2Q9NXR7 383 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 A0A0X1KG70 313 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CCDC182A6NF36 153 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 METTL12A8MUP2 240 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 GTPBP1O00178 669 aaKnown RBP14.47□□□□□ -0.09
LRFN1-201ENST00000248668 PSMD9O00233 223 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 RNF13O43567 381 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 PTP4A3O75365 173 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 HPGDP15428 266 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 PYCR1P32322 319 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 FASLGP48023 281 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 TP53I3Q53FA7 332 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 IDNKQ5T6J7 187 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 C1orf189Q5VU69 101 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CNIH2Q6PI25 160 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CBLN3Q6UW01 205 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 MED25Q71SY5 747 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 OR52N1Q8NH53 320 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 SMPDL3BQ92485 455 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF346Q9UL40 294 aaKnown RBP14.47□□□□□ -0.09
LRFN1-201ENST00000248668 PLCL2Q9UPR0 1127 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 SLC35A3Q9Y2D2 325 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 WDFY4Q6ZS81 3184 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 TMEM150CB9EJG8 249 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 SHC1P29353 583 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 ATP12AP54707 1039 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CD226Q15762 336 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CDONQ4KMG0 1287 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 SHISA6Q6ZSJ9 500 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CCDC28AQ8IWP9 274 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 PHOSPHO1Q8TCT1 267 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 ZPLD1Q8TCW7 415 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 SENP5Q96HI0 755 aaPredicted RBP14.47□□□□□ -0.09
LRFN1-201ENST00000248668 CLEC4AQ9UMR7 237 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 WDFY3Q8IZQ1 3526 aa14.47□□□□□ -0.09
LRFN1-201ENST00000248668 A0A0G2JMP0 313 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 A0A1W2PR77 199 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 ZNF217O75362 1048 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 CSF3P09919 207 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 RFX2P48378 723 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 FGFBP1Q14512 234 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 SYT9Q86SS6 491 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 NR2C2APQ86WQ0 139 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 OR6C4Q8NGE1 309 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 OR5J2Q8NH18 312 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 OR5W2Q8NH69 310 aa14.46□□□□□ -0.09
LRFN1-201ENST00000248668 FYTTD1Q96QD9 318 aaKnown RBP14.46□□□□□ -0.09
LRFN1-201ENST00000248668 A0A1W2PRG6 482 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 SERINC4A6NH21 518 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 BLOC1S5-TXNDC5H3BN57 136 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 J3QRE1 110 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 TSPAN4O14817 238 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 CPNE3O75131 537 aaKnown RBP14.46□□□□□ -0.1
LRFN1-201ENST00000248668 OR2B3O76000 313 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 SBK2P0C263 348 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 HK1P19367 917 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 ARL4DP49703 201 aa14.46□□□□□ -0.1
LRFN1-201ENST00000248668 OR10A3P58181 314 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms