RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TACR2P21452 398 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 ELAVL4P26378 380 aaKnown RBP12.03□□□□□ -0.48
VAMP4-201ENST00000236192 HTR1FP30939 366 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 SNCAP37840 140 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 XCR1P46094 333 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 OR1G1P47890 313 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 DHPSP49366 369 aaPredicted RBP12.03□□□□□ -0.48
VAMP4-201ENST00000236192 PTTG1IPP53801 180 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 PGGHGQ32M88 737 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 CTXN3Q4LDR2 81 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 PSAPL1Q6NUJ1 521 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 OR8J2Q8NGG1 315 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 FRZBQ92765 325 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 PRRC1Q96M27 445 aa12.03□□□□□ -0.48
VAMP4-201ENST00000236192 EXOSC3Q9NQT5 275 aaKnown RBP12.03□□□□□ -0.48
VAMP4-201ENST00000236192 hCG_1809904A0A1W2PP81 198 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 A0A1W2PR64 198 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 A0A1W2PRV1 198 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 WNT1P04628 370 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 CRABP1P29762 137 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 BDH1Q02338 343 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 OR8G1Q15617 311 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 OTUD1Q5VV17 481 aaPredicted RBP12.02□□□□□ -0.48
VAMP4-201ENST00000236192 C11orf87Q6NUJ2 197 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 OR11H4Q8NGC9 324 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF417Q8TAU3 575 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 SAMD10Q9BYL1 202 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 ABHD16BQ9H3Z7 469 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 ZDHHC3Q9NYG2 299 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.48
VAMP4-201ENST00000236192 KIF13BQ9NQT8 1826 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ANKRD61A6NGH8 418 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ANKRD66B4E2M5 251 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 BLOC1S5-TXNDC5H3BN57 136 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 PQBP1O60828 265 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 PCDH8O95206 1070 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 BPIP17213 487 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 CXCL2P19875 107 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 GNG10P50151 68 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF84P51523 738 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 DVL1P1P54792 670 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 UBE2MP61081 183 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 GUCA2BQ16661 112 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 DHRS7BQ6IAN0 325 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 OVCH1Q7RTY7 1134 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 C6orf120Q7Z4R8 191 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 C12orf40Q86WS4 652 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ARRDC4Q8NCT1 418 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 OR56A1Q8NGH5 318 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 OR51S1Q8NGJ8 323 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 HLA-CQ95604 372 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 FBXO17Q96EF6 278 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 TXN2Q99757 166 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 TEX101Q9BY14 249 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 AUNIPQ9H7T9 357 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 GOLGA2P5Q9HBQ8 144 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 LAMP5Q9UJQ1 280 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 C2orf78A6NCI8 922 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 HMGB3O15347 200 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 PFKMP08237 780 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF10P21506 573 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 SNRPD1P62314 119 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RPS26P62854 115 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ACER2Q5QJU3 275 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 FAM83HQ6ZRV2 1179 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 SERINC5Q86VE9 423 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 NUDT13Q86X67 352 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 OR1S1Q8NH92 325 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 GHSRQ92847 366 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 FAM46BQ96A09 425 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 GPR61Q9BZJ8 451 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 EGLN3Q9H6Z9 239 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ADAP2Q9NPF8 381 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 SIRT5Q9NXA8 310 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 PCOLCE2Q9UKZ9 415 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RBM7Q9Y580 266 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 CSAG2Q9Y5P2 127 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 H3BSH0 61 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RHOP08100 348 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 CST2P09228 141 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 GRK6P43250 576 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 SERINC3Q13530 473 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 RBMS3Q6XE24 437 aaKnown RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 Q6ZRG5 221 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 NRMQ8IXM6 262 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 ZNF101Q8IZC7 436 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 CERS5Q8N5B7 392 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 EXTL1Q92935 676 aa12.02□□□□□ -0.49
VAMP4-201ENST00000236192 FGF20Q9NP95 211 aaPredicted RBP12.02□□□□□ -0.49
VAMP4-201ENST00000236192 M0R3H8 397 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 IFNA5P01569 189 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 PMP2P02689 132 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 ABOP16442 354 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 IMPA1P29218 277 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 GUK1Q16774 197 aa12.01□□□□□ -0.49
VAMP4-201ENST00000236192 LINC00303Q3SY05 128 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms