RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 UBA52P62987 128 aaKnown RBP12.47□□□□□ -0.41
NEK4-201ENST00000233027 ARHGAP19Q14CB8 494 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 ZNF750Q32MQ0 723 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 TMEM244Q5VVB8 128 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 PELI3Q8N2H9 469 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 POC1BQ8TC44 478 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 UBE2FQ969M7 185 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 SFXN2Q96NB2 322 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 SORCS2Q96PQ0 1159 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 LMF2Q9BU23 707 aaKnown RBP12.47□□□□□ -0.41
NEK4-201ENST00000233027 ZFP57Q9NU63 452 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 HHLA2Q9UM44 414 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 PCDHGA1Q9Y5H4 931 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 A0A0B4J2A0 478 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 VEGFCP49767 419 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 DLX5P56178 289 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 SSX2Q16385 188 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 PLK5Q496M5 336 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 OR52I1Q8NGK6 324 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 PRR14Q9BWN1 585 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 SHPKQ9UHJ6 478 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 IFNA10P01566 189 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 GDNFP39905 211 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 CD79BP40259 229 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 EEF1A2Q05639 463 aaKnown RBP12.47□□□□□ -0.41
NEK4-201ENST00000233027 SLC14A2Q15849 920 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 OR5K2Q8NHB8 316 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 NT5DC2Q9H857 520 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 NPC1O15118 1278 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 APEX1P27695 318 aaKnown RBP12.47□□□□□ -0.41
NEK4-201ENST00000233027 IDUAP35475 653 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 CSNK1DP48730 415 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 KCNJ10P78508 379 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 POU3F1Q03052 451 aaPredicted RBP12.47□□□□□ -0.41
NEK4-201ENST00000233027 HACD4Q5VWC8 232 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 C17orf99Q6UX52 265 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 MOB3CQ70IA8 216 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 PRICKLE2Q7Z3G6 844 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 TMEM255BQ8WV15 326 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 TOPAZ1Q8N9V7 1692 aa12.47□□□□□ -0.41
NEK4-201ENST00000233027 TNFRSF10AO00220 468 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 SULT1C2O00338 296 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 FABP7O15540 132 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CA3P07451 260 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CTBSQ01459 385 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 SLC14A1Q13336 389 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 TUBB3Q13509 450 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 SLC39A11Q8N1S5 342 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 TBC1D20Q96BZ9 403 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 SEC22AQ96IW7 307 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 TNFRSF13CQ96RJ3 184 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 SPIN2AQ99865 258 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 SPIN2BQ9BPZ2 258 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 GON7Q9BXV9 100 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 PITHD1Q9GZP4 211 aaPredicted RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 CXorf36Q9H7Y0 433 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CLEC2DQ9UHP7 191 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 MED16Q9Y2X0 877 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 MAN2B1O00754 1011 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 LILRB5O75023 590 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 ZNF28P17035 718 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CD53P19397 219 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 POLR2HP52434 150 aaKnown RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 EMP2P54851 167 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 GGTA1PQ4G0N0 100 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 RPL22L1Q6P5R6 122 aaKnown RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 UNQ6126/PRO20091Q6UXV3 157 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 C11orf54Q9H0W9 315 aaPredicted RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 SERTAD4Q9NUC0 356 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 TMEM72A0PK05 275 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 A6NL46 340 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 ZNF593O00488 134 aaPredicted RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 ELAVL4P26378 380 aaKnown RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 OPRD1P41143 372 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 LDLRAD1Q5T700 205 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 TPRA1Q86W33 373 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CPT1CQ8TCG5 803 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 NANOS1Q8WY41 292 aaKnown RBP12.46□□□□□ -0.41
NEK4-201ENST00000233027 SNX18Q96RF0 628 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CHRDQ9H2X0 955 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 GCM1Q9NP62 436 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 CPNE7Q9UBL6 633 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 ATG4BQ9Y4P1 393 aa12.46□□□□□ -0.41
NEK4-201ENST00000233027 FOXE1O00358 373 aaPredicted RBP12.46□□□□□ -0.42
NEK4-201ENST00000233027 SURF4O15260 269 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 SEC14L2O76054 403 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 FURINP09958 794 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 PCSK6P29122 969 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 CCR6P51684 374 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 C9orf135Q5VTT2 229 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 SLC46A3Q7Z3Q1 461 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 MIB2Q96AX9 1013 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 SLC39A13Q96H72 371 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 KATNB1Q9BVA0 655 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 AMBRA1Q9C0C7 1298 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 PRAMEF26H0Y7S4 382 aa12.46□□□□□ -0.42
NEK4-201ENST00000233027 ZNF217O75362 1048 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms