RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 CDK2AP1O14519 115 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 SERPINA3P01011 423 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 CXCL3P19876 107 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 DNASE1P24855 282 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 SSR2P43308 183 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 NRG3P56975 720 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 PUDPQ08623 228 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 ELOCQ15369 112 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 UAP1L1Q3KQV9 507 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 ELFN2Q5R3F8 820 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 METRNLQ641Q3 311 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 LYPD4Q6UWN0 246 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 PLEKHM3Q6ZWE6 761 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 AMZ2Q86W34 360 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 TIGD4Q8IY51 512 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 LHFPL5Q8TAF8 219 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 PHYHIPQ92561 330 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 PGLYRP3Q96LB9 341 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 GSX2Q9BZM3 304 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 LRRN3Q9H3W5 708 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 ZNF624Q9P2J8 865 aaPredicted RBP18.94■□□□□ 0.62
SNX3-201ENST00000230085 IL20RAQ9UHF4 553 aa18.94■□□□□ 0.62
SNX3-201ENST00000230085 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 NAP1L6A6NFF2 107 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 DUXAA6NLW8 204 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CPSF4LA6NMK7 179 aaKnown RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 G3V3Q6 166 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 MEN1O00255 615 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 DVL2O14641 736 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 YKT6O15498 198 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 MPC2O95563 127 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ZGLP1P0C6A0 271 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 NAGAP17050 411 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CTRB1P17538 263 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CSNK2A2P19784 350 aaPredicted RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 RPS7P62081 194 aaKnown RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 ACTC1P68032 377 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ACTA1P68133 377 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ILF3Q12906 894 aaKnown RBP eCLIP18.93■□□□□ 0.62
SNX3-201ENST00000230085 MAPK14Q16539 360 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CTRB2Q6GPI1 263 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 SLC48A1Q6P1K1 146 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 TMEM65Q6PI78 240 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 RTL4Q6ZR62 310 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 TAF8Q7Z7C8 310 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 COMMD7Q86VX2 200 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 SIAH3Q8IW03 269 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 SMIM4Q8WVI0 70 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CNRIP1Q96F85 164 aaPredicted RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 ZNF578Q96N58 590 aaPredicted RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 RBP7Q96R05 134 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ACTRT3Q9BYD9 372 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 LIN7BQ9HAP6 207 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CMC2Q9NRP2 79 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 PRELID1Q9Y255 219 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 MAB21L2Q9Y586 359 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 TRAV6A0A075B6T7 132 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 TPPPO94811 219 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 THBS1P07996 1170 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ZNF883P0CG24 379 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 GIMD1P0DJR0 217 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ACTR1BP42025 376 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 RGS8P57771 180 aaPredicted RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 ACTR1AP61163 376 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 ST3GAL2Q16842 350 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 DEFB133Q30KQ1 61 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 AMER3Q8N944 861 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 OR51G2Q8NGK0 314 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 OMA1Q96E52 524 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 GIMAP5Q96F15 307 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 WBP1Q96G27 269 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 FCRL4Q96PJ5 515 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 MCHR1Q99705 422 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 UTP23Q9BRU9 249 aaKnown RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 TMPRSS13Q9BYE2 586 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 GSDMCQ9BYG8 508 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 EVA1AQ9H8M9 152 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 AKAP7Q9P0M2 348 aaPredicted RBP18.93■□□□□ 0.62
SNX3-201ENST00000230085 FBXL3Q9UKT7 428 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 CSNK1G3Q9Y6M4 447 aa18.93■□□□□ 0.62
SNX3-201ENST00000230085 DAPL1A0PJW8 107 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 OR6C65A6NJZ3 312 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 LMO7DNF2Z398 122 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 H7BY64 318 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 I3L521 148 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 OR1F1O43749 312 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 FMO6PO60774 539 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 STX11O75558 287 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 CH25HO95992 272 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 AHRP35869 848 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 PRDX1Q06830 199 aaKnown RBP18.92■□□□□ 0.62
SNX3-201ENST00000230085 POU4F2Q12837 409 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 EIPR1Q53HC9 387 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 STPG1Q5TH74 334 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 VRK2Q86Y07 508 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 SLITRK4Q8IW52 837 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 IQCF2Q8IXL9 164 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 SPICQ8N5J4 248 aa18.92■□□□□ 0.62
SNX3-201ENST00000230085 TMEM99Q8N816 258 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms