RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 SLC25A43Q8WUT9 341 aaPredicted RBP12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 ASB5Q8WWX0 329 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 PROX1Q92786 737 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 PRRG4Q9BZD6 226 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 TRIM2Q9C040 744 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 PCDHAC1Q9H158 963 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 RPS6KB2Q9UBS0 482 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 TESQ9UGI8 421 aaKnown RBP12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 PRDM4Q9UKN5 801 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 BAG5Q9UL15 447 aa12.88□□□□□ -0.35
SUPT4H1-201ENST00000225504 SPTAN1Q13813 2472 aaKnown RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 CPSF4LA6NMK7 179 aaKnown RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 ZNF814B7Z6K7 855 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 C19orf84I3L1E1 186 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 SULT2B1O00204 365 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 ZNF208O43345 1280 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 TNFSF13O75888 250 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 SYNGR4O95473 234 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 ZNF682O95780 498 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 SERPINA1P01009 418 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 PTNP21246 168 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 BMP5P22003 454 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 FUT4P22083 530 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 KIR2DL2P43627 348 aaPredicted RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 CDH12P55289 794 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 RAC3P60763 192 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 EGR4Q05215 589 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 ZNF239Q16600 458 aaKnown RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 CBLL1Q75N03 491 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 RASSF5Q8WWW0 418 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 TMEM27Q9HBJ8 222 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 PAQR5Q9NXK6 330 aaPredicted RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 MCTS1Q9ULC4 181 aaKnown RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 SNX13Q9Y5W8 968 aa12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 INTS1Q8N201 2190 aaKnown RBP12.87□□□□□ -0.35
SUPT4H1-201ENST00000225504 IGKV1D-42A0A075B6H8 117 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 A0A0B4J2E0 115 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 A0A1B0GX12 115 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 A0A1W2PNV4 684 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ELOA3DA6NLF2 546 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 SMAD9O15198 467 aaKnown RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 RAMP1O60894 148 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 NPIPB7O75200 414 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 FPR1P21462 350 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 CLK1P49759 484 aaKnown RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 OR2B6P58173 313 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 SIRPAP78324 504 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 FXNQ16595 210 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ELOA3BQ3SY89 546 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ALG10BQ5I7T1 473 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 SAMD4BQ5PRF9 694 aaKnown RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 VWA1Q6PCB0 445 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ULK3Q6PHR2 472 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 C6orf89Q6UWU4 347 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 MAMDC2Q7Z304 686 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 RANBP3LQ86VV4 465 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ELOA3Q8NG57 546 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ABHD3Q8WU67 409 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 SLC38A4Q969I6 547 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 CPNE4Q96A23 557 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 FAM162AQ96A26 154 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 DDIT4LQ96D03 193 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 POTEKPQ9BYX7 375 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 EVA1AQ9H8M9 152 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 TIGARQ9NQ88 270 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ADPRHL2Q9NX46 363 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 NDE1Q9NXR1 346 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 PLEKHB1Q9UF11 243 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 ING1Q9UK53 422 aaPredicted RBP12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 HDGFL3Q9Y3E1 203 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 MPDZO75970 2070 aa12.86□□□□□ -0.35
SUPT4H1-201ENST00000225504 A8MVM7 634 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 FMO6PO60774 539 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 PMS2P2O95744 297 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 FKBP2P26885 142 aaKnown RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 MAP2K6P52564 334 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 NCALDP61601 193 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 FOXD4Q12950 439 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 GUSBP1Q15486 140 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 C1orf140Q5VVS0 124 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 LINC00114Q6XXX2 140 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 WDR88Q6ZMY6 472 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 FCRLAQ7L513 359 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 BTLAQ7Z6A9 289 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 TSEN54Q7Z6J9 526 aaKnown RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 CCDC103Q8IW40 242 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 ADAMTS16Q8TE57 1224 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 RNF128Q8TEB7 428 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 DNAJA4Q8WW22 397 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 ZNF775Q96BV0 537 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 SLC7A6OSQ96CW6 309 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 STARD4Q96DR4 205 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 KTI12Q96EK9 354 aaPredicted RBP12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 SLC47A1Q96FL8 570 aa12.85□□□□□ -0.35
SUPT4H1-201ENST00000225504 CLPTM1LQ96KA5 538 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms