RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 RAB38P57729 211 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 RPS7P62081 194 aaKnown RBP22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 INSL4Q14641 139 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 HSD17B12Q53GQ0 312 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 ARL9Q6T311 187 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 THSD4Q6ZMP0 1018 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 CEACAM19Q7Z692 300 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 CA13Q8N1Q1 262 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 SLC25A45Q8N413 288 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 POMGNT2Q8NAT1 580 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 SMPDL3BQ92485 455 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 AKAP1Q92667 903 aaKnown RBP eCLIP22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 UPRTQ96BW1 309 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 HCAR1Q9BXC0 346 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 ENKD1Q9H0I2 346 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 ZCCHC4Q9H5U6 513 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 ABRACLQ9P1F3 81 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 MAU2Q9Y6X3 613 aa22.91■■□□□ 1.26
RUNDC3A-201ENST00000225441 LOC105369274A0A096LPK9 316 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 LOC102723532A0A0G2JNH3 316 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 A0A0J9YY10 115 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 OGG1O15527 345 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 SHC1P29353 583 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 ACTA2P62736 377 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 ACTG2P63267 376 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 PITPNAQ00169 270 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 ZNF85Q03923 595 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 ZNF550Q7Z398 422 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 NR2C2APQ86WQ0 139 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 OR4N4Q8N0Y3 316 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 UBE2J2Q8N2K1 259 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 UCK1Q9HA47 277 aa22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 MEPEQ9NQ76 525 aaPredicted RBP22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.9■■□□□ 1.26
RUNDC3A-201ENST00000225441 A0A0G2JMP0 313 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 A0A0X1KG70 313 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 ANKRD34BA5PLL1 514 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 CFIP05156 583 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 AHCYP23526 432 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 PSMD4P55036 377 aaKnown RBP22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 SNRPNP63162 240 aaKnown RBP22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 GGTLC2Q14390 218 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 C14orf28Q4W4Y0 310 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 PLA1AQ53H76 456 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 RABEPKQ7Z6M1 372 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 CDH24Q86UP0 819 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 OR4M2Q8NGB6 313 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 OR4M1Q8NGD0 313 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 C7orf50Q9BRJ6 194 aaKnown RBP22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 WACQ9BTA9 647 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 ZNF275Q9NSD4 429 aaPredicted RBP22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 ZMIZ1Q9ULJ6 1067 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 CLCA3PQ9Y6N3 262 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 SDK1Q7Z5N4 2213 aa22.89■■□□□ 1.26
RUNDC3A-201ENST00000225441 TMEM131Q92545 1883 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 A0A0G2JK05 382 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 A0A1B0GTQ1 180 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 BLACEA4D250 179 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 DNAJB6O75190 326 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 REM1O75628 298 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 GATBO75879 557 aaKnown RBP22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR2T7P0C7T2 308 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 EFR3AQ14156 821 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 GPR176Q14439 515 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 ZNHIT3Q15649 155 aaPredicted RBP22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 THOC7Q6I9Y2 204 aaKnown RBP22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 LINC00114Q6XXX2 140 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 OOSP2Q86WS3 158 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 CMIPQ8IY22 773 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR2T27Q8NH04 317 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 CEP76Q8TAP6 659 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 C4orf36Q96KX1 117 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 PGLYRP3Q96LB9 341 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 SLX1AQ9BQ83 275 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR51V1Q9H2C8 321 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 FSCN3Q9NQT6 498 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 HRASLS2Q9NWW9 162 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 COPZ2Q9P299 210 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 RASD1Q9Y272 281 aa22.89■■□□□ 1.25
RUNDC3A-201ENST00000225441 A0A1B0GWA3 101 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 ARL6IP5O75915 188 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 ALX3O95076 343 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 DHFRP00374 187 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 GIMD1P0DJR0 217 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 EPHA8P29322 1005 aaPredicted RBP22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 SAMD12Q8N8I0 201 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 ANKRD9Q96BM1 317 aaPredicted RBP22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 FBXO34Q9NWN3 711 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 KMT2EQ8IZD2 1858 aa22.88■■□□□ 1.25
RUNDC3A-201ENST00000225441 OR5K3A6NET4 321 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 LILRA5A6NI73 299 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 LDB3O75112 727 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 LGALS3BPQ08380 585 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 MRPL28Q13084 256 aaKnown RBP22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 CRMP1Q14194 572 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ISXQ2M1V0 245 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 HLA-BQ31612 363 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 ACSM3Q53FZ2 586 aa22.87■■□□□ 1.25
RUNDC3A-201ENST00000225441 FIGNL1Q6PIW4 674 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms