RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 UQCRC1P31930 480 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 ARHGAP11BQ3KRB8 267 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 C4orf46Q504U0 113 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 NUP54Q7Z3B4 507 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 MSANTD3Q96H12 275 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 Q96M85 177 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 SLC6A18Q96N87 628 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 CDCA3Q99618 268 aaPredicted RBP12.56□□□□□ -0.4
RAB3D-201ENST00000222120 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.56□□□□□ -0.4
RAB3D-201ENST00000222120 SRRQ9GZT4 340 aa12.56□□□□□ -0.4
RAB3D-201ENST00000222120 FZD7O75084 574 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 AHSA1O95433 338 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 CELA2BP08218 269 aaPredicted RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 SBK2P0C263 348 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 HOXB9P17482 250 aaPredicted RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 FAUP35544 74 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 HTR3AP46098 478 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 ACTA2P62736 377 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 ACTG2P63267 376 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 CDK5Q00535 292 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 KCNAB1Q14722 419 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 SFXN4Q6P4A7 337 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 TMEM184AQ6ZMB5 413 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 LMF1Q96S06 567 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 GPER1Q99527 375 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 PPIL3Q9H2H8 161 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 LMAN1LQ9HAT1 526 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 PLSCR3Q9NRY6 295 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 RBFOX1Q9NWB1 397 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 H2AFB2P0C5Z0 115 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 ERP29P30040 261 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 E2F1Q01094 437 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 TPBGQ13641 420 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 SF3A2Q15428 464 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 SCGB2B2Q4G0G5 96 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 COMTD1Q86VU5 262 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 FBLIM1Q8WUP2 373 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 OR2A14Q96R47 310 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 SLC2A4RGQ9NR83 387 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 C4orf51C9J302 202 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 SELENOFO60613 162 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 CCKBRP32239 447 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 TSFMP43897 325 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 RPS5P46782 204 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 ZNF613Q6PF04 617 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 C19orf47Q8N9M1 422 aaKnown RBP12.55□□□□□ -0.4
RAB3D-201ENST00000222120 OR51Q1Q8NH59 317 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 DHRS1Q96LJ7 313 aa12.55□□□□□ -0.4
RAB3D-201ENST00000222120 HIST1H1CP16403 213 aaKnown RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 MNX1P50219 401 aaPredicted RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 ZP2Q05996 745 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 SLC35D2Q76EJ3 337 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 GPAT4Q86UL3 456 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 ATCAYQ86WG3 371 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 UBQLNLQ8IYU4 475 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 ELSPBP1Q96BH3 223 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 GPN1Q9HCN4 374 aaPredicted RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 SERTAD3Q9UJW9 196 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 FARSAQ9Y285 508 aaKnown RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 CACNG2Q9Y698 323 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 GABRB1P18505 474 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DNASE1P24855 282 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 RAB38P57729 211 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 FGFBP1Q14512 234 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 PYHIN1Q6K0P9 492 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 THSD4Q6ZMP0 1018 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 FCRLAQ7L513 359 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 OR5H6Q8NGV6 325 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 ZDHHC12Q96GR4 267 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 PSD2Q9BQI7 771 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 HOXD1Q9GZZ0 328 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 OR10A5Q9H207 317 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 TMEM185BQ9H7F4 350 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 FBRSQ9HAH7 460 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUSP22Q9NRW4 184 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 MED17Q9NVC6 651 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 KLRF1Q9NZS2 232 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 TRPM7Q96QT4 1865 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 A0A1B0GW55 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4L2P0CJ85 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4L3P0CJ86 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4L4P0CJ87 422 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4L5P0CJ88 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4L6P0CJ89 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4L7P0CJ90 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 POU4F2Q12837 409 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 NIPAL3Q6P499 406 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 QSOX2Q6ZRP7 698 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 Q6ZS52 159 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 MED25Q71SY5 747 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 SLITRK4Q8IW52 837 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 RNF113BQ8IZP6 322 aaKnown RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 MORN4Q8NDC4 146 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DNAJA4Q8WW22 397 aaPredicted RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DPCDQ9BVM2 203 aaPredicted RBP12.54□□□□□ -0.4
RAB3D-201ENST00000222120 SLC25A19Q9HC21 320 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 DUX4Q9UBX2 424 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 MGAT4AQ9UM21 535 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 FXYD6-FXYD2A0A087WZ82 144 aa12.54□□□□□ -0.4
RAB3D-201ENST00000222120 LALBAP00709 142 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms