RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 A8MUA0 341 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 IMPA2O14732 288 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 SLC43A1O75387 559 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 LYPD3O95274 346 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 CCR6P51684 374 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 NTRK2Q16620 822 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 ALG10BQ5I7T1 473 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 PRPF38BQ5VTL8 546 aaKnown RBP12.09□□□□□ -0.47
CTNS-201ENST00000046640 NKAIN2Q5VXU1 208 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 NIPAL3Q6P499 406 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 CEACAM19Q7Z692 300 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 ACBD7Q8N6N7 88 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 C19orf47Q8N9M1 422 aaKnown RBP12.09□□□□□ -0.47
CTNS-201ENST00000046640 RCBTB1Q8NDN9 531 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 MMABQ96EY8 250 aaPredicted RBP12.09□□□□□ -0.47
CTNS-201ENST00000046640 MAP6Q96JE9 813 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 FN3KQ9H479 309 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 FOLH1BQ9HBA9 442 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 ADAM30Q9UKF2 790 aa12.09□□□□□ -0.47
CTNS-201ENST00000046640 KIR2DS5A0A0G2JLQ3 304 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 A0A0G2JNG1 304 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 A0A1W2PRG6 482 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 PRR23D1E9PI22 279 aaPredicted RBP12.08□□□□□ -0.47
CTNS-201ENST00000046640 KIR2DS3K7RE56 304 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 RGS9O75916 674 aaPredicted RBP12.08□□□□□ -0.47
CTNS-201ENST00000046640 PRR23D2P0DMB1 279 aaPredicted RBP12.08□□□□□ -0.47
CTNS-201ENST00000046640 IL9P15248 144 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 CXCL3P19876 107 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 RAB38P57729 211 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 C19orf57Q0VDD7 668 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 KIR2DS5Q14953 304 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 ZSWIM7Q19AV6 140 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 MEPCEQ7L2J0 689 aaKnown RBP12.08□□□□□ -0.47
CTNS-201ENST00000046640 PRSS45Q7RTY3 260 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 RFLNBQ8N5W9 214 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 OR4C3Q8NH37 302 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 OR4K13Q8NH42 304 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 PIGKQ92643 395 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 CTHRC1Q96CG8 243 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 CCDC120Q96HB5 630 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 MS4A3Q96HJ5 214 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 SOHLH2Q9NX45 425 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 STMN3Q9NZ72 180 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 ERVK-19Q9WJR5 959 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 SIGLEC7Q9Y286 467 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 OR10H1Q9Y4A9 318 aa12.08□□□□□ -0.47
CTNS-201ENST00000046640 CABIN1Q9Y6J0 2220 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 A0A087WV62 115 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 PEPDP12955 493 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 DRD5P21918 477 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 RPS4Y1P22090 263 aaKnown RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 GIFP27352 417 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 GFERP55789 205 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 TNK1Q13470 666 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 KCNAB1Q14722 419 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 POU4F3Q15319 338 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 PRAMEF17Q5VTA0 474 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 FAM109AQ8N4B1 249 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 SDR9C7Q8NEX9 313 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 LMX1AQ8TE12 382 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ORAI1Q96D31 301 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 TGM7Q96PF1 710 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 TEAD3Q99594 435 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 KCNJ15Q99712 375 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 SEMA6CQ9H3T2 930 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 C8orf33Q9H7E9 229 aaPredicted RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 TMEM184BQ9Y519 407 aaPredicted RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 CACNA1CQ13936 2221 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 SLC35E2P0CK97 266 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 S1PR1P21453 382 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ATP12AP54707 1039 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ZNHIT3Q15649 155 aaPredicted RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 LYPD4Q6UWN0 246 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 BPHLQ86WA6 291 aaPredicted RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 C17orf47Q8NEP4 570 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 OR11H7Q8NGC8 314 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 OR5W2Q8NH69 310 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 OR4C6Q8NH72 309 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ANGPTL6Q8NI99 470 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 TRMT10AQ8TBZ6 339 aaKnown RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 GCDHQ92947 438 aaPredicted RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 STACQ99469 402 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ORAI3Q9BRQ5 295 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 BABAM2Q9NXR7 383 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 WSB2Q9NYS7 404 aaPredicted RBP12.08□□□□□ -0.48
CTNS-201ENST00000046640 POMT2Q9UKY4 750 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ADAM18Q9Y3Q7 739 aa12.08□□□□□ -0.48
CTNS-201ENST00000046640 ARID1BQ8NFD5 2236 aaPredicted RBP12.07□□□□□ -0.48
CTNS-201ENST00000046640 FAM86C2PA6NEL3 165 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 FOXS1O43638 330 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 HLA-DQB1P01920 261 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 OR12D2P58182 307 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 DEFB133Q30KQ1 61 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 NPSR1Q6W5P4 371 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 TRILQ7L0X0 811 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 SPERTQ8NA61 448 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 OR4D9Q8NGE8 314 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 OR52E2Q8NGJ4 325 aa12.07□□□□□ -0.48
CTNS-201ENST00000046640 BRIX1Q8TDN6 353 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms