RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 PLCE1Q9P212 2302 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MED13Q9UHV7 2174 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 TRAPPC2LH3BP13 241 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 KHNYNO15037 678 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 SLC43A1O75387 559 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 DHPSP49366 369 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 IL17AQ16552 155 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 SH3RF2Q8TEC5 729 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 OR1F2PQ96R84 312 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 NMNAT2Q9BZQ4 307 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 FBRSL1Q9HCM7 1045 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 IL20RAQ9UHF4 553 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 STSP08842 583 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 MMP7P09237 267 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 BPHLQ86WA6 291 aaPredicted RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 ZDHHC1Q8WTX9 485 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 OCSTAMPQ9BR26 566 aa5.71□□□□□ -1.5
VPS13D-201ENST00000011700 GAR1Q9NY12 217 aaKnown RBP5.71□□□□□ -1.5
VPS13D-201ENST00000011700 RCCD1A6NED2 376 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 FLT3LGP49771 235 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 WDR5P61964 334 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SNRPGP62308 76 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 UGT8Q16880 541 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF620Q6ZNG0 422 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 Q6ZRG5 221 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 GGHQ92820 318 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 FBXL8Q96CD0 374 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CAMK2AQ9UQM7 478 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CA5BQ9Y2D0 317 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 UMAD1C9J7I0 102 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SERPINA7P05543 415 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PSMB1P20618 241 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TACR3P29371 465 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PRKAR1BP31321 381 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 DCTP40126 519 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 DGKEP52429 567 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 YPEL5P62699 121 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 HBA1P69905 142 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SLC35A1P78382 337 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 BTNL8Q6UX41 500 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SLC22A24Q8N4F4 322 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 OR7G3Q8NG95 312 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 OR1S2Q8NGQ3 325 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 GPX8Q8TED1 209 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 APH1BQ8WW43 257 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MUCL1Q96DR8 90 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 EGLN1Q9GZT9 426 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SLC6A20Q9NP91 592 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TAS2R16Q9NYV7 291 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ADARB1P78563 741 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 CDK5R2Q13319 367 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 GRIN2CQ14957 1233 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ACSM3Q53FZ2 586 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 RNASE12Q5GAN4 147 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 DPY19L2P2Q6ZN68 376 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SLC51AQ86UW1 340 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SIGLEC10Q96LC7 697 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SAMD8Q96LT4 415 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MICU1Q9BPX6 476 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 EBF4Q9BQW3 602 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF251Q9BRH9 671 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TP63Q9H3D4 680 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 C1GALT1Q9NS00 363 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 THSD1Q9NS62 852 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 IL37Q9NZH6 218 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 HCFC1P51610 2035 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF254O75437 659 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TFPTP0C1Z6 253 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SYN1P17600 705 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MAT2AP31153 395 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MTNR1BP49286 362 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 APOFQ13790 326 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 RTP2Q5QGT7 225 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF684Q5T5D7 378 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF765Q7L2R6 523 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PRSS58Q8IYP2 241 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PGBD5Q8N414 524 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 LILRB4Q8NHJ6 448 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 JOSD2Q8TAC2 188 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 SLC7A6Q92536 515 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 C1orf198Q9H425 327 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ACOXLQ9NUZ1 547 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ASF1BQ9NVP2 202 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ALKBH4Q9NXW9 302 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 INSL5Q9Y5Q6 135 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MCRIP1C9JLW8 97 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 GBAP04062 536 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ACP5P13686 325 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 FDXRP22570 491 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 GRB7Q14451 532 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 MPPED2Q15777 294 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PLK5Q496M5 336 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 ZNF322Q6U7Q0 402 aaPredicted RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 OR9K2Q8NGE7 335 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 TMEM163Q8TC26 289 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 HMGB4Q8WW32 186 aa5.7□□□□□ -1.5
VPS13D-201ENST00000011700 BARD1Q99728 777 aaKnown RBP5.7□□□□□ -1.5
VPS13D-201ENST00000011700 PAPOLGQ9BWT3 736 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms