RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Pax4P32115 349 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Defa-rs7P50715 91 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Dcaf7P61963 342 aaKnown RBP20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Rps15P62843 145 aaKnown RBP20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gdf3Q07104 366 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Znf488Q5HZG9 337 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Olfr10Q60883 311 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Pgr15lQ80T54 456 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 SetmarQ80UJ9 309 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Ebf4Q8K4J2 599 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Tnk1Q99ML2 666 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Wdsub1Q9D0I6 474 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Acad8Q9D7B6 413 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Moap1Q9ERH6 352 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Trim2Q9ESN6 744 aaKnown RBP20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Foxo1Q9R1E0 652 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 TfecQ9WTW4 317 aa20.83■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cacna1aP97445 2368 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm3752A6NAT4 150 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm11397F6V5V4 377 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Adamts15P59384 950 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Elavl1P70372 326 aaKnown RBP20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cmklr1P97468 371 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Spata13Q5DU57 656 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Laptm5Q61168 261 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cd55Q61475 390 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Adam26bQ6IMH6 699 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gpr6Q6YNI2 363 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cpeb4Q7TN98 729 aaKnown RBP20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Serpinb9fQ80UK5 377 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Serpina3fQ80X76 445 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Zfp418Q8BFS8 652 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Poldip3Q8BG81 420 aaKnown RBP20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Wdr92Q8BGF3 357 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Rnf26Q8BUH7 424 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Clec2hQ8C1T8 218 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Ncr1Q8C567 325 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Rfwd3Q8CIK8 774 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 CipcQ8R0W1 432 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Far1Q922J9 515 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Dach2Q925Q8 634 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Eif2b1Q99LC8 305 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cers5Q9D6K9 414 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 UqcrbQ9D855 111 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Zc3h8Q9JJ48 305 aaKnown RBP20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Nxt1Q9QZV9 140 aa20.82■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Zfp383A0A087WRR7 490 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 GlsD3Z7P3 674 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm3149E9PW52 257 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm21103E9Q2Q1 267 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 FaimlJ3QPY3 178 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm3476K7N6V0 257 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm8362K7N6Y6 257 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Vmn2r109K7N747 858 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 NgpO08692 167 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Ccrl2O35457 360 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Nme6O88425 189 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cyp4a10O88833 509 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 DckP43346 260 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Otx2P80206 289 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Obox3Q3UT54 335 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Exosc3Q7TQK4 274 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 JamlQ80UL9 379 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Fbxo34Q80XI1 695 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 H2-M10.3Q85ZW6 330 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Zfp763Q8BIC7 588 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 CtsoQ8BM88 312 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Q8C784 167 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Tmem268Q8R239 342 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Dus3lQ91XI1 637 aaKnown RBP20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Lactb2Q99KR3 288 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Riok2Q9CQS5 547 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Dusp12Q9D0T2 339 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Fam166aQ9D4K5 319 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Tmem38bQ9DAV9 292 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Lrit3W8DXL4 681 aa20.81■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Zfp981A2A8V7 445 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Olfr74A2BHP6 318 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Gm45711E0CXA2 391 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Arhgap40E9Q6X9 672 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Olfr190K7N5T5 307 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 ChrneP20782 493 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 AccslQ3UX83 580 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Man1c1Q6NXK9 625 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Ckmt2Q6P8J7 419 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 2810021J22RikQ8BIB6 539 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 BivmQ8CBX9 502 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Asb6Q91ZU1 418 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Chmp1b1Q99LU0 199 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 GrifinQ9D1U0 144 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Qtrt1Q9JMA2 403 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Rhox2cA2AWL9 191 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Usp36B1AQJ2 1098 aaKnown RBP20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Vmn2r117K7N6V1 857 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Hcn1O88704 910 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Apex1P28352 317 aaKnown RBP20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Mmp2P33434 662 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 TesP47226 423 aaKnown RBP20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Cdk5P49615 292 aa20.8■□□□□ 0.92
Scn1b-201ENSMUST00000098548 Bglap3P54615 95 aa20.8■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms