RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Nr4a3Q9QZB6 627 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 DptQ9QZZ6 201 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Dock6Q8VDR9 2080 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Anapc1P53995 1944 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tet2Q4JK59 1912 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr1206A2ATJ9 307 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm43720E0CXM8 267 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tmem200cJ3QK46 637 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr1360K9J6X0 313 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 B3galt2O54905 422 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 BckdkO55028 412 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Spsb2O88838 264 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Chrnb1P09690 501 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gna13P27601 377 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Nkx2-6P43688 289 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Crmp1P97427 572 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Rgs16P97428 201 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Opa3Q505D7 179 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 HpQ61646 347 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr1359Q7TQU5 313 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ces2eQ8BK48 559 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tmem17Q8K0U3 198 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Dusp15Q8R4V2 235 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr1043Q8VFK4 314 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Fitm1Q91V79 292 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Lamtor1Q9CQ22 161 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Cyp2u1Q9CX98 530 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Senp8Q9D2Z4 221 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Lpcat2bQ9D5U0 516 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Hoga1Q9DCU9 321 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ndrg3Q9QYF9 375 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Adamdec1Q9R0X2 467 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Thbs4Q9Z1T2 963 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Crybg1A0A0G2JG52 2065 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Zbtb34A2ATY4 518 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Scgb2b3D2XZ38 112 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm1330D3Z460 184 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm7714E9Q079 131 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Olfr190K7N5T5 307 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Brd7O88665 651 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Thbs1P35441 1170 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Serpina3mQ03734 418 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 TefmQ5SSK3 364 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 CalcrQ60755 533 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 HlxQ61670 476 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Pou4f3Q63955 338 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gm5346Q7M766 736 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Pcdh19Q80TF3 1145 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Hs6st2Q80UW0 612 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Mrps7Q80X85 242 aaKnown RBP9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Ablim2Q8BL65 612 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Gper1Q8BMP4 375 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Mettl7a1Q8C6B0 244 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Tnk1Q99ML2 666 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Arfgap1Q9EPJ9 414 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Fzd2Q9JIP6 570 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Plscr3Q9JIZ9 296 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Xpr1Q9Z0U0 695 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 NfkbiaQ9Z1E3 314 aa9.09□□□□□ -0.95
Ccdc40-202ENSMUST00000053440 Phf3B2RQG2 2025 aaKnown RBP9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr655E9Q252 308 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cfl1P18760 166 aaKnown RBP9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Pou3f3P31361 497 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 AcadlP51174 430 aaKnown RBP9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 PitpnaP53810 271 aaKnown RBP9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tead3P70210 439 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fam219bQ14DQ1 197 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Kcnk6Q3TBV4 313 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Il10rbQ61190 349 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 NovQ64299 354 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Dsg1cQ7TSF0 911 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fmr1nbQ80ZA7 238 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fam210aQ8BGY7 273 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Lix1lQ8BQ89 337 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 GatcQ8CBY0 155 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Slc16a14Q8K1C7 512 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 DctdQ8K2D6 178 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Hrh4Q91ZY2 391 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cmtm3Q99LJ5 184 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gid4Q9CPY6 217 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Q9CQF4 240 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zmynd19Q9CQG3 227 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 HnrnpdlQ9Z130 301 aaKnown RBP9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Trbv2A0A0B4J1G8 114 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Chrna10B2RX82 447 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Clip3B9EHT4 547 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 GlsD3Z7P3 674 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 FahP35505 419 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 VegfbP49766 207 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Nup43P59235 380 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Qsox2Q3TMX7 692 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ankrd37Q569N2 159 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Epha1Q60750 977 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Laptm5Q61168 261 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 ParpbpQ6IRT3 573 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 CltbQ6IRU5 229 aaKnown RBP9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr657Q7TRP7 319 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Q8BHG2 160 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Clba1Q8BHN9 321 aa9.08□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Oscp1Q8BHW2 379 aa9.08□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 56.9 ms