RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 FBXW10Q5XX13 1052 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 DLEU7Q6UYE1 221 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 TUSC5Q8IXB3 177 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 BBS10Q8TAM1 723 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
PHGDH-231ENST00000641939 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 ARMC7Q9H6L4 198 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 FANCFQ9NPI8 374 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 KLHL9Q9P2J3 617 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.4□□□□□ -0.26
PHGDH-231ENST00000641939 OSGIN1Q9UJX0 560 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 PRDM4Q9UKN5 801 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 HDGFL3Q9Y3E1 203 aa13.4□□□□□ -0.26
PHGDH-231ENST00000641939 F8P00451 2351 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 TEP1Q99973 2627 aaKnown RBP13.39□□□□□ -0.27
PHGDH-231ENST00000641939 TMED7-TICAM2A0A0A6YYA0 188 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CASKO14936 926 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 ANGPT2O15123 496 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 SMAD9O15198 467 aaKnown RBP13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CYTIPO60759 359 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 PGM3O95394 542 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 PMS2P2O95744 297 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 YES1P07947 543 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 ARAFP10398 606 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CCNA2P20248 432 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 TACR3P29371 465 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CCKARP32238 428 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 MAP2K6P52564 334 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 ZNF311Q5JNZ3 666 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 BEND4Q6ZU67 534 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 ZNF550Q7Z398 422 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CDC20BQ86Y33 519 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 C10orf111Q8N326 155 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CLIP4Q8N3C7 705 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 DPP10Q8N608 796 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 NFKBIDQ8NI38 313 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 TSPEARQ8WU66 669 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 ARL5BQ96KC2 179 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 WFIKKN1Q96NZ8 548 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 MED18Q9BUE0 208 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 SPATA9Q9BWV2 254 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 KLHL4Q9C0H6 718 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 ADAM19Q9H013 955 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 IKZF5Q9H5V7 419 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 C12orf49Q9H741 205 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 MED4Q9NPJ6 270 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 FGFR1OP2Q9NVK5 253 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 NDUFAF1Q9Y375 327 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 TMED7Q9Y3B3 224 aa13.39□□□□□ -0.27
PHGDH-231ENST00000641939 CELSR1Q9NYQ6 3014 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ZNF208O43345 1280 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 FESP07332 822 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 VIMP08670 466 aaKnown RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ETS2P15036 469 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 GPX2P18283 190 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ACAA2P42765 397 aaKnown RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ARFIP2P53365 341 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 COPZ1P61923 177 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 CDK6Q00534 326 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 GUCY1A3Q02108 690 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 RASGEF1BQ0VAM2 473 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 RUNDC3AQ59EK9 446 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 WBP2NLQ6ICG8 309 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 REEP3Q6NUK4 255 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 NUFIP2Q7Z417 695 aaKnown RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 DHDDSQ86SQ9 333 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 MTDHQ86UE4 582 aaKnown RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 NRGNQ92686 78 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 DDIT4LQ96D03 193 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ZHX1-C8orf76Q96EF9 292 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 PSD2Q9BQI7 771 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 CPPED1Q9BRF8 314 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 OR11A1Q9GZK7 315 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 TMEM38AQ9H6F2 299 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 BCO1Q9HAY6 547 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 MRGBPQ9NV56 204 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 KLHL28Q9NXS3 571 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ZNF226Q9NYT6 803 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ING1Q9UK53 422 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 ITGB1BP2Q9UKP3 347 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 CHST2Q9Y4C5 530 aa13.38□□□□□ -0.27
PHGDH-231ENST00000641939 MAP1AP78559 2803 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-231ENST00000641939 TMEM72A0PK05 275 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 ZNF724A8MTY0 619 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 DNPH1O43598 174 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 HRGP04196 525 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 KLK2P20151 261 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 SLC6A2P23975 617 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 DNAJA1P31689 397 aaKnown RBP13.37□□□□□ -0.27
PHGDH-231ENST00000641939 CGB2Q6NT52 195 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 STAC2Q6ZMT1 411 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 SERPINA11Q86U17 422 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 RETREG3Q86VR2 466 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 SLC35B4Q969S0 331 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 DNAJA3Q96EY1 480 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 ANKRD27Q96NW4 1050 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 CGREF1Q99674 301 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 CCDC134Q9H6E4 229 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 TMEM181Q9P2C4 612 aa13.37□□□□□ -0.27
PHGDH-231ENST00000641939 TRAPPC4Q9Y296 219 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms