RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PEPDP12955 493 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 PRKACGP22612 351 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 PEX2P28328 305 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 ADH6P28332 368 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 LSM11P83369 360 aaKnown RBP eCLIP15.81■□□□□ 0.12
PHGDH-230ENST00000641927 GK3PQ14409 553 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 ST3GAL2Q16842 350 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 MICAQ29983 383 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 HYAL4Q2M3T9 481 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 SLC25A53Q5H9E4 307 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 RNFT1Q5M7Z0 435 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 ADGRG3Q86Y34 549 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 HIPK1Q86Z02 1210 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 GTPBP8Q8N3Z3 284 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-230ENST00000641927 FAM109AQ8N4B1 249 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 OR10G2Q8NGC3 310 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 OR4K5Q8NGD3 323 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 OR9Q2Q8NGE9 314 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 GIPC3Q8TF64 312 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 HS6ST2Q96MM7 605 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 SFXN2Q96NB2 322 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 UBL7Q96S82 380 aaPredicted RBP15.81■□□□□ 0.12
PHGDH-230ENST00000641927 TMEM185BQ9H7F4 350 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 SERINC1Q9NRX5 453 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 CHRNA9Q9UGM1 479 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 LHX6Q9UPM6 363 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 MED31Q9Y3C7 131 aa15.81■□□□□ 0.12
PHGDH-230ENST00000641927 TMEM72A0PK05 275 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 ETV2O00321 342 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-230ENST00000641927 PIP5K1CO60331 668 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 HPNP05981 417 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 ZNF17P17021 662 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 IL11P20809 199 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 RBM34P42696 430 aaKnown RBP15.8■□□□□ 0.12
PHGDH-230ENST00000641927 UGT2B15P54855 530 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.8■□□□□ 0.125e-8■■■□□ 19.2
PHGDH-230ENST00000641927 GLYR1Q49A26 553 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-230ENST00000641927 LINC00114Q6XXX2 140 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 MBOAT2Q6ZWT7 520 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 NRMQ8IXM6 262 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 PFN4Q8NHR9 129 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 FUZQ9BT04 418 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 C9orf16Q9BUW7 83 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 OR2B2Q9GZK3 357 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 DEFB127Q9H1M4 99 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 TSPAN10Q9H1Z9 355 aaPredicted RBP15.8■□□□□ 0.12
PHGDH-230ENST00000641927 RASSF4Q9H2L5 321 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 KIF17Q9P2E2 1029 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 MRPS18CQ9Y3D5 142 aaKnown RBP15.8■□□□□ 0.12
PHGDH-230ENST00000641927 NCKAP5O14513 1909 aa15.8■□□□□ 0.12
PHGDH-230ENST00000641927 OR2M5A3KFT3 312 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 C7orf72A4D263 438 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 H3BML4 177 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 TFPIP10646 304 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 DLX5P56178 289 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 SLC10A1Q14973 349 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 SNCBQ16143 134 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 C3orf33Q6P1S2 294 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 ZBTB49Q6ZSB9 765 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 MEX3DQ86XN8 651 aaKnown RBP15.79■□□□□ 0.12
PHGDH-230ENST00000641927 EPHX4Q8IUS5 362 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 CBR4Q8N4T8 237 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 EXD3Q8N9H8 876 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 ATG16L2Q8NAA4 619 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 PIGXQ8TBF5 258 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 SMPDL3BQ92485 455 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 PNPLA2Q96AD5 504 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 DNAJA3Q96EY1 480 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 NRBF2Q96F24 287 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 LDAHQ9H6V9 325 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 EXO5Q9H790 373 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 KRCC1Q9NPI7 259 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-230ENST00000641927 QPCTLQ9NXS2 382 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 SPIN1Q9Y657 262 aaPredicted RBP15.79■□□□□ 0.12
PHGDH-230ENST00000641927 TPRP12270 2363 aaKnown RBP15.79■□□□□ 0.12
PHGDH-230ENST00000641927 OPN1LWP04000 364 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 POU2F1P14859 743 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 IFNGR2P38484 337 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 CRYZQ08257 329 aaKnown RBP15.79■□□□□ 0.12
PHGDH-230ENST00000641927 LINC00471Q8N535 108 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 C10orf53Q8N6V4 93 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 TEX19Q8NA77 164 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 AQP11Q8NBQ7 271 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 TAAR6Q96RI8 345 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 ZNF426Q9BUY5 554 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 OR11A1Q9GZK7 315 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 SLC6A15Q9H2J7 730 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 COQ10BQ9H8M1 238 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 SLC6A5Q9Y345 797 aa15.79■□□□□ 0.12
PHGDH-230ENST00000641927 IGKV1D-42A0A075B6H8 117 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 ZC3H12DA2A288 527 aaKnown RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 A8MVM7 634 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 CASQ2O14958 399 aaPredicted RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 EFNA2O43921 213 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 IFI30P13284 250 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 SFTPDP35247 375 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 GCKP35557 465 aa15.78■□□□□ 0.12
PHGDH-230ENST00000641927 PTDSS1P48651 473 aaKnown RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 ALDH6A1Q02252 535 aaKnown RBP15.78■□□□□ 0.12
PHGDH-230ENST00000641927 SELENBP1Q13228 472 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms