RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 OR5B2Q96R09 309 aa23.87■■□□□ 1.41
VEGFA-231ENST00000640499 ZNF607Q96SK3 696 aa23.87■■□□□ 1.41
VEGFA-231ENST00000640499 ECSITQ9BQ95 431 aa23.87■■□□□ 1.41
VEGFA-231ENST00000640499 SPATA5L1Q9BVQ7 753 aa23.87■■□□□ 1.41
VEGFA-231ENST00000640499 PKDREJQ9NTG1 2253 aa23.87■■□□□ 1.41
VEGFA-231ENST00000640499 ZC3H12DA2A288 527 aaKnown RBP23.86■■□□□ 1.41
VEGFA-231ENST00000640499 SERPINB7O75635 380 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 CGAP01215 116 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 OPN1SWP03999 348 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 CRHP06850 196 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 HTR2AP28223 471 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 HTR3AP46098 478 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 PDSS1Q5T2R2 415 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 CCDC80Q76M96 950 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 ARMC8Q8IUR7 673 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 CADM2Q8N3J6 435 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 DNAJA3Q96EY1 480 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 REXO5Q96IC2 774 aaKnown RBP23.86■■□□□ 1.41
VEGFA-231ENST00000640499 ARMC7Q9H6L4 198 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 EFCAB1Q9HAE3 211 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 CACYBPQ9HB71 228 aaKnown RBP23.86■■□□□ 1.41
VEGFA-231ENST00000640499 MCTS1Q9ULC4 181 aaKnown RBP23.86■■□□□ 1.41
VEGFA-231ENST00000640499 CLEC4AQ9UMR7 237 aa23.86■■□□□ 1.41
VEGFA-231ENST00000640499 SHOX2O60902 331 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-231ENST00000640499 CD247P20963 164 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 PRDX6P30041 224 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 RAC3P60763 192 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 WBP2NLQ6ICG8 309 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 PPP4R4Q6NUP7 873 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 HACD2Q6Y1H2 254 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 TMPPEQ6ZT21 453 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 RNF128Q8TEB7 428 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 SLC25A43Q8WUT9 341 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-231ENST00000640499 C3orf49Q96BT1 292 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 SPOCK3Q9BQ16 436 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 ING1Q9UK53 422 aaPredicted RBP23.85■■□□□ 1.41
VEGFA-231ENST00000640499 PRDM4Q9UKN5 801 aa23.85■■□□□ 1.41
VEGFA-231ENST00000640499 IGHV3-15A0A0B4J1V0 119 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 TMEM229AB2RXF0 380 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 SYNGR4O95473 234 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 FCGR2AP12318 317 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 SLC7A1P30825 629 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 KCNJ5P48544 419 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 DIO1P49895 249 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 ASCL1P50553 236 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 MYBPHQ13203 477 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 SLC30A8Q8IWU4 369 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 ANKS4BQ8N8V4 417 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 OR4D11Q8NGI4 311 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 ABHD3Q8WU67 409 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 CPNE4Q96A23 557 aaPredicted RBP23.84■■□□□ 1.41
VEGFA-231ENST00000640499 PRRG4Q9BZD6 226 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 ADAM21Q9UKJ8 722 aa23.84■■□□□ 1.41
VEGFA-231ENST00000640499 PRORSD1PA6NEY8 169 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 SMAD9O15198 467 aaKnown RBP23.83■■□□□ 1.41
VEGFA-231ENST00000640499 ZNF208O43345 1280 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 SS18L1O75177 396 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-231ENST00000640499 LGI1O95970 557 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 TFPIP10646 304 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 IMPDH2P12268 514 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 PRF1P14222 555 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 UQCRBP14927 111 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 SIRPAP78324 504 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 BNIP2Q12982 314 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 SNTB1Q13884 538 aaKnown RBP23.83■■□□□ 1.41
VEGFA-231ENST00000640499 PATL1Q86TB9 770 aaKnown RBP23.83■■□□□ 1.41
VEGFA-231ENST00000640499 ATG4DQ86TL0 474 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-231ENST00000640499 DMRTC2Q8IXT2 367 aaPredicted RBP23.83■■□□□ 1.41
VEGFA-231ENST00000640499 ZNF295-AS1Q8N0V1 137 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 CNEP1R1Q8N9A8 125 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 CMTM5Q96DZ9 223 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 ARHGDIGQ99819 225 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 TIGARQ9NQ88 270 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 ARL8BQ9NVJ2 186 aa23.83■■□□□ 1.41
VEGFA-231ENST00000640499 DCHS2Q6V1P9 2916 aa23.83■■□□□ 1.4
VEGFA-231ENST00000640499 A8MXE2 369 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 FAM220BPB1ANY3 271 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 EEF1E1-BLOC1S5C9J1V9 151 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 NME4O00746 187 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 EEF1E1O43324 174 aaKnown RBP23.82■■□□□ 1.4
VEGFA-231ENST00000640499 FAM107AO95990 144 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 CLK1P49759 484 aaKnown RBP23.82■■□□□ 1.4
VEGFA-231ENST00000640499 NUDT2P50583 147 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 VEZF1Q14119 521 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 NPTX1Q15818 432 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 MEX3BQ6ZN04 569 aaKnown RBP23.82■■□□□ 1.4
VEGFA-231ENST00000640499 FAM214BQ7L5A3 538 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 LSMEM1Q8N8F7 131 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 RNASE6Q93091 150 aaKnown RBP23.82■■□□□ 1.4
VEGFA-231ENST00000640499 GMPPAQ96IJ6 420 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-231ENST00000640499 HOPXQ9BPY8 73 aaPredicted RBP23.82■■□□□ 1.4
VEGFA-231ENST00000640499 PIGMQ9H3S5 423 aa23.82■■□□□ 1.4
VEGFA-231ENST00000640499 MPDZO75970 2070 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 ZNF814B7Z6K7 855 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 M0R3H8 397 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 HNRNPRO43390 633 aaKnown RBP23.81■■□□□ 1.4
VEGFA-231ENST00000640499 FKBP2P26885 142 aaKnown RBP23.81■■□□□ 1.4
VEGFA-231ENST00000640499 CPA2P48052 419 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 SLC7A2P52569 658 aa23.81■■□□□ 1.4
VEGFA-231ENST00000640499 COPZ1P61923 177 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms