RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 ZNF550Q7Z398 422 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 ARIH2OSQ8N7S6 290 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF321PQ8N8H1 164 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 OR51A7Q8NH64 312 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 PTP4A1Q93096 173 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 PHOX2BQ99453 314 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 KATNB1Q9BVA0 655 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 HCAR1Q9BXC0 346 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 OR10A5Q9H207 317 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF304Q9HCX3 659 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 FBXO4Q9UKT5 387 aa13.86□□□□□ -0.19
TRIM3-215ENST00000639856 IGHV5-10-1A0A0J9YXX1 117 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 C12orf71A8MTZ7 269 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 C17orf105B2RV13 164 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 PRR23D1E9PI22 279 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 TIAF1O95411 115 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 HLA-DPB1P04440 258 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 NGFRP08138 427 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 PRR23D2P0DMB1 279 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 GAAP10253 952 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 FBLP22087 321 aaKnown RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF362Q5T0B9 420 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ARHGAP40Q5TG30 622 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 LINC00114Q6XXX2 140 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 OAFQ86UD1 273 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 TMEM151BQ8IW70 566 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF615Q8N8J6 731 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SLC37A3Q8NCC5 494 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 PTPMT1Q8WUK0 201 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 KISS1RQ969F8 398 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 CLIP3Q96DZ5 547 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 OR1F2PQ96R84 312 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 LRRN3Q9H3W5 708 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 C14orf119Q9NWQ9 140 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 BAIAP2Q9UQB8 552 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SLC35A3Q9Y2D2 325 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 IGKV3D-11A0A0A0MRZ8 115 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ZC3H12DA2A288 527 aaKnown RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SYNDIG1LA6NDD5 238 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SLC22A31A6NKX4 558 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 TOX3O15405 576 aaPredicted RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 YKT6O15498 198 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 PSMD4P55036 377 aaKnown RBP13.85□□□□□ -0.19
TRIM3-215ENST00000639856 BDH1Q02338 343 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SQSTM1Q13501 440 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SERTAD2Q14140 314 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ZNF79Q15937 498 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 TCEAL6Q6IPX3 200 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ULK3Q6PHR2 472 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 KLBQ86Z14 1044 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 CMIPQ8IY22 773 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 SLC43A2Q8N370 569 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 OR4D9Q8NGE8 314 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 IFI44Q8TCB0 444 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 TCEAL3Q969E4 200 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 CCDC74BQ96LY2 380 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 TMED9Q9BVK6 235 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ABCB9Q9NP78 766 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 ASB6Q9NWX5 421 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 CTSFQ9UBX1 484 aa13.85□□□□□ -0.19
TRIM3-215ENST00000639856 A0A1W2PQL4 384 aaPredicted RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 RIIAD1A6NNX1 92 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 HOXD12P35452 270 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 CD300CQ08708 224 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 KLHL12Q53G59 568 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 VASNQ6EMK4 673 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 RTL4Q6ZR62 310 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 GDPD3Q7L5L3 318 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 OR8H2Q8N162 312 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SLC38A9Q8NBW4 561 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 ATP6V1C2Q8NEY4 427 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 CEP76Q8TAP6 659 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 AP3S1Q92572 193 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 OR6C1Q96RD1 312 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 TNFRSF13CQ96RJ3 184 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 TEAD3Q99594 435 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 ALG8Q9BVK2 526 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 MIXL1Q9H2W2 232 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 ISG20L2Q9H9L3 353 aaKnown RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 OR10H1Q9Y4A9 318 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 MMACHCQ9Y4U1 282 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 HEATR5AQ86XA9 2040 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 TTC36A6NLP5 189 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 GABRPO00591 440 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 PPP1R3DO95685 299 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 CER1O95813 267 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 APOA1P02647 267 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 ANKRD34CP0C6C1 535 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SP9P0CG40 484 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 PEPDP12955 493 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SPNP16150 400 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 GALP22466 123 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 GALNSP34059 522 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 CRYZQ08257 329 aaKnown RBP13.84□□□□□ -0.19
TRIM3-215ENST00000639856 GPR50Q13585 617 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 FHL1Q13642 323 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 ZMAT1Q5H9K5 638 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 DDI2Q5TDH0 399 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 SLC23A3Q6PIS1 610 aa13.84□□□□□ -0.19
TRIM3-215ENST00000639856 KIRREL2Q6UWL6 708 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms