RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 HS3ST1O14792 307 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 UBDO15205 165 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 DBIP07108 87 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 IL7RP16871 459 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 RPS4Y1P22090 263 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 IDH2P48735 452 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 TAB1Q15750 504 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 KRTAP21-3Q3LHN1 58 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 SLC9B1Q4ZJI4 515 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 ABLIM2Q6H8Q1 611 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 BHLHA15Q7RTS1 189 aaPredicted RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 PEX5LQ8IYB4 626 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 ZNF440Q8IYI8 595 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 ZNF100Q8IYN0 542 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 ZNF611Q8N823 705 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 PIGXQ8TBF5 258 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 TMEM171Q8WVE6 324 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 CNOT9Q92600 299 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 GSX2Q9BZM3 304 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 ESRP2Q9H6T0 727 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 SDR39U1Q9NRG7 319 aaPredicted RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 THUMPD1Q9NXG2 353 aaKnown RBP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 CALML5Q9NZT1 146 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 P2RX2Q9UBL9 471 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 TRAPPC4Q9Y296 219 aa13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 NIPBLQ6KC79 2804 aaeCLIP13.79□□□□□ -0.2
PTPRVP-204ENST00000639439 PRR14LQ5THK1 2151 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 FAM171A2A8MVW0 826 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ZNF208O43345 1280 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ANP32DO95626 131 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 C1QCP02747 245 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 INHBBP09529 407 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ADSLP30566 484 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 POLR2HP52434 150 aaKnown RBP13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 PLAURQ03405 335 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ZSWIM7Q19AV6 140 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 COX20Q5RI15 118 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ADAM5Q6NVV9 412 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 HMGN2P46Q86SG4 172 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ADGRG3Q86Y34 549 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 PNPT1Q8TCS8 783 aaKnown RBP13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ZNF75CPQ92670 426 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 DDIT4LQ96D03 193 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ITCHQ96J02 903 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 ZNF300Q96RE9 604 aaPredicted RBP13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 CXorf56Q9H5V9 222 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 TMEM181Q9P2C4 612 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 RNF115Q9Y4L5 304 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 NAV3Q8IVL0 2385 aa13.78□□□□□ -0.2
PTPRVP-204ENST00000639439 TMED7-TICAM2A0A0A6YYA0 188 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 CFAP73A6NFT4 308 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 EIF1BO60739 113 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 PLAUP00749 431 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 CD3EP07766 207 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 PAX1P15863 534 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 SLC1A3P43003 542 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 POLR2JP52435 117 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 CRISP3P54108 245 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 CAPRIN1Q14444 709 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 TSC22D1Q15714 1073 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 LIN52Q52LA3 116 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 NCMAPQ5T1S8 102 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 MRPL2Q5T653 305 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 AGBL2Q5U5Z8 902 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 MAVSQ7Z434 540 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 YTHDF3Q7Z739 585 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 P2RY8Q86VZ1 359 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 MIER2Q8N344 545 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 IGFBPL1Q8WX77 278 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 AKAP1Q92667 903 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 ZNF775Q96BV0 537 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 PERPQ96FX8 193 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 ARL5BQ96KC2 179 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 BDH2Q9BUT1 245 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 GSX1Q9H4S2 264 aaPredicted RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 TPT1P8Q9HAU6 139 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 CACYBPQ9HB71 228 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 PRSS50Q9UI38 385 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 OSGIN1Q9UJX0 560 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 NOSIPQ9Y314 301 aaKnown RBP13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 TMED7Q9Y3B3 224 aa13.77□□□□□ -0.21
PTPRVP-204ENST00000639439 RAI1Q7Z5J4 1906 aaPredicted RBP13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 FAM234BA2RU67 622 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 TMEM247A6NEH6 219 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 ZNF716A6NP11 495 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 AP3D1O14617 1153 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 ADAM11O75078 769 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 COX5AP20674 150 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 CRATP43155 626 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 PTH2RP49190 550 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 MVDP53602 400 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 SLC16A1P53985 500 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 OR2B6P58173 313 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 DSTNP60981 165 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 SLC35A1P78382 337 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 EPS8Q12929 822 aa13.76□□□□□ -0.21
PTPRVP-204ENST00000639439 TIMM23BQ5SRD1 257 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms