RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ERCC8Q13216 396 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 KIAA0087Q14695 138 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 ZKSCAN8Q15776 578 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 GUCA2BQ16661 112 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 KBTBD12Q3ZCT8 623 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 BEND6Q5SZJ8 279 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CPTPQ5TA50 214 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 OR8G2PQ6IF36 304 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 HSDL2Q6YN16 418 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 C16orf47Q6ZP98 133 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 TMPPEQ6ZT21 453 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 FAM47EQ6ZV65 393 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CHCHD4Q8N4Q1 142 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 OCC1Q8TAD7 63 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 C17orf50Q8WW18 174 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CACNG8Q8WXS5 425 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 HIST1H4GQ99525 98 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 GAL3ST1Q99999 423 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 RHOXF2Q9BQY4 288 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 ZDHHC6Q9H6R6 413 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 SLCO1B3Q9NPD5 702 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 DNAJC17Q9NVM6 304 aaKnown RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 ASF1BQ9NVP2 202 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 SMPD3Q9NY59 655 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 ERVK-18Q9QC07 812 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 FAM169AQ9Y6X4 670 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 A6NIZ1 184 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 ZNF716A6NP11 495 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 H0YHG0 523 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 KIF2AO00139 706 aaPredicted RBP-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 AGPAT2O15120 278 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 TM9SF1O15321 606 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 NUPL2O15504 423 aaKnown RBP-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 MBTPS2O43462 519 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 SELENOFO60613 162 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 JAK2O60674 1132 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 TPST2O60704 377 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 CTAG2O75638 210 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 S1PR2O95136 353 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 FYNP06241 537 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 PFN1P07737 140 aaKnown RBP-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 INAFM2P0DMQ5 153 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 NMT1P30419 496 aaKnown RBP-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 HOXD13P35453 343 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 NAMPTP43490 491 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 SGSHP51688 502 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 DLX1P56177 255 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 RAP1BP61224 184 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 NTHL1P78549 312 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 UBE2V2Q15819 145 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 CYBRD1Q53TN4 286 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 LIPNQ5VXI9 398 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 ITPRIPL1Q6GPH6 555 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 PAQR7Q86WK9 346 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 SMAP1Q8IYB5 467 aaPredicted RBP-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 CCDC191Q8NCU4 936 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 NLNQ9BYT8 704 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 ALDH8A1Q9H2A2 487 aaPredicted RBP-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 GANQ9H2C0 597 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 PPDPFQ9H3Y8 114 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 RNPEPL1Q9HAU8 725 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 FBXO8Q9NRD0 319 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 CD84Q9UIB8 345 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 VPS28Q9UK41 221 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 CDH7Q9ULB5 785 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 PRR14LQ5THK1 2151 aa-0.93□□□□□ -2.56
LMBR1-222ENST00000638959 TRGV4A0A0C4DH28 118 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 BTNL10A8MVZ5 291 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 BCAS1O75363 584 aaPredicted RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 ECI2O75521 394 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 GAS8O95995 478 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 ASGR1P07306 291 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 VIMP08670 466 aaKnown RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 ZNF735P0CB33 412 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 MYBL1P10243 752 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 CPA3P15088 417 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 HPGDP15428 266 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 PORP16435 677 aaPredicted RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 BDNFP23560 247 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 FRKP42685 505 aaPredicted RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 EMDP50402 254 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 BIRC2Q13490 618 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 TFDP1Q14186 410 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 SMUG1Q53HV7 270 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 ANKRD20A8PQ5CZ79 823 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 FAM91A1Q658Y4 838 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 KCTD11Q693B1 232 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 CWC27Q6UX04 472 aaKnown RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 NCCRP1Q6ZVX7 275 aaPredicted RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 SPATA21Q7Z572 469 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 SGPP2Q8IWX5 399 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 C4orf19Q8IY42 314 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 CCAR2Q8N163 923 aaKnown RBP-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 ZNF563Q8TA94 476 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 MUC7Q8TAX7 377 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 GPR119Q8TDV5 335 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 SLC25A46Q96AG3 418 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 VMP1Q96GC9 406 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 CYP2S1Q96SQ9 504 aa-0.94□□□□□ -2.56
LMBR1-222ENST00000638959 SLC25A23Q9BV35 468 aa-0.94□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms