RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SPRED2Q7Z698 418 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR4N4Q8N0Y3 316 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR4D9Q8NGE8 314 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 LRRC20Q8TCA0 184 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 GRHL3Q8TE85 626 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 PAWRQ96IZ0 340 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 CMTM3Q96MX0 182 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 USP36Q9P275 1121 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 MKI67P46013 3256 aaKnown RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 MEIKINA0A087WXM9 373 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 PRSS38A1L453 326 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 SULT1A3P0DMM9 295 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 SULT1A4P0DMN0 295 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 DRD5P21918 477 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 MAP3K8P41279 467 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 RBM34P42696 430 aaKnown RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 POU6F2P78424 691 aaPredicted RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 KLF9Q13886 244 aaPredicted RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 TP53I3Q53FA7 332 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 RNASE12Q5GAN4 147 aaKnown RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 OVCH1Q7RTY7 1134 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 GLRX5Q86SX6 157 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR56B4Q8NH76 319 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR14C36Q8NHC7 312 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 RPLP0P6Q8NHW5 317 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 FLVCR1-AS1Q8TAF5 88 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 SMIM4Q8WVI0 70 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 TNFRSF13CQ96RJ3 184 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF426Q9BUY5 554 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 GSDMCQ9BYG8 508 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 SERTAD3Q9UJW9 196 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 GPR171O14626 319 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 TNFSF14O43557 240 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 CTSVO60911 334 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 EML2O95834 649 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 CD1AP06126 327 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR2T7P0C7T2 308 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 POLR2CP19387 275 aaPredicted RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 CCR6P51684 374 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 SNTB2Q13425 540 aaKnown RBP18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 POMGNT2Q8NAT1 580 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 CAMKVQ8NCB2 501 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR2T27Q8NH04 317 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 DOK4Q8TEW6 326 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 GIMAP1Q8WWP7 306 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 PELI1Q96FA3 418 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 TRPV4Q9HBA0 871 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 MCCC2Q9HCC0 563 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 TMEM74BQ9NUR3 256 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 EMC3Q9P0I2 261 aa18.55■□□□□ 0.56
SYNGAP1-227ENST00000638142 SYNDIG1LA6NDD5 238 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 TRABD2BA6NFA1 517 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 PLRG1O43660 514 aaKnown RBP18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 IFI6P09912 130 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 FCARP24071 287 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 HSF2Q03933 536 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 GPR139Q6DWJ6 353 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 NUDT18Q6ZVK8 323 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 RFLNBQ8N5W9 214 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 BMPERQ8N8U9 685 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR51Q1Q8NH59 317 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 SPACA6W5XKT8 324 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A0B4J203 849 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A1B0GWA3 101 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 LINC01553A4QN01 128 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 FGF17O60258 216 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 LDB3O75112 727 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 TFP02787 698 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 APODP05090 189 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 GABRA3P34903 492 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 SIRPAP78324 504 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 RIPPLY1Q0D2K3 151 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 GGTLC2Q14390 218 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 ST3GAL2Q16842 350 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 TANGO2Q6ICL3 276 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF687Q8N1G0 1237 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 OMA1Q96E52 524 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 CNN2Q99439 309 aaKnown RBP18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 FLRT3Q9NZU0 649 aa18.54■□□□□ 0.56
SYNGAP1-227ENST00000638142 C5orf67F2Z3F1 127 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF593O00488 134 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 PRKACBP22694 351 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 SRP54P61011 504 aaKnown RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 CAMK2DQ13557 499 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 FHL1Q13642 323 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 PRICKLE4Q2TBC4 344 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 UBE2NLQ5JXB2 153 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 RPL22L1Q6P5R6 122 aaKnown RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 SYT9Q86SS6 491 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 BPHLQ86WA6 291 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 CNOT9Q92600 299 aaKnown RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZMYND19Q96E35 227 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 ERMAPQ96PL5 475 aaPredicted RBP18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 MYADMQ96S97 322 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 NRIP3Q9NQ35 241 aa18.53■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A1W2PPK0 400 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF860A6NHJ4 632 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF749O43361 778 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 GPR75O95800 540 aa18.52■□□□□ 0.56
SYNGAP1-227ENST00000638142 MT-ND4P03905 459 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms