RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 XKR8Q9H6D3 395 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ISG20L2Q9H9L3 353 aaKnown RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 MIEF1Q9NQG6 463 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ASF1BQ9NVP2 202 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 SLC22A14Q9Y267 594 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 GNG14A0A1W2PPG7 69 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 UPK3BL1B0FP48 263 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF879B4DU55 563 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 UPK3BL2E5RIL1 263 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 PYCARD-AS1I3L0S3 204 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 FLRT2O43155 660 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 FKTNO75072 461 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 SH3BGRLO75368 114 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 CLDN11O75508 207 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF239Q16600 458 aaKnown RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 FAM27D1Q5T7N8 215 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM244Q5VVB8 128 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 GLT8D1Q68CQ7 371 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 RAB12Q6IQ22 244 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 LPCAT3Q6P1A2 487 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM71Q6P5X7 295 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 CHST9Q7L1S5 443 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 C6orf120Q7Z4R8 191 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TECPR1Q7Z6L1 1165 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 ZNF467Q7Z7K2 595 aaPredicted RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 IQCHQ86VS3 1027 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM200AQ86VY9 491 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 GID4Q8IVV7 300 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 CMTM4Q8IZR5 234 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 OR4D11Q8NGI4 311 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 NEURL3Q96EH8 262 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 LURAP1Q96LR2 239 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 MOGAT1Q96PD6 335 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 MAP3K3Q99759 626 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 MRI1Q9BV20 369 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 TAS2R10Q9NYW0 307 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 RCC2Q9P258 522 aaKnown RBP11.13□□□□□ -0.63
CAPN3-221ENST00000638141 CBY1Q9Y3M2 126 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 OR10H1Q9Y4A9 318 aa11.13□□□□□ -0.63
CAPN3-221ENST00000638141 A0A0D9SEW6 157 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 OR2W5A6NFC9 320 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ACOT7O00154 380 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 MT-ND5P03915 603 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 CD22P20273 847 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 CASP9P55211 416 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ELAVL2Q12926 359 aaKnown RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ZDHHC20Q5W0Z9 365 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 FAM71E1Q6IPT2 247 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 PRSS55Q6UWB4 352 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TMPRSS11FQ6ZWK6 438 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ADCK2Q7Z695 626 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 CLDN19Q8N6F1 224 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 OR52B4Q8NGK2 314 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 AKR7LQ8NHP1 331 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 PRRC1Q96M27 445 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ELF4Q99607 663 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 NRIP2Q9BQI9 281 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 DZANK1Q9NVP4 752 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ZDHHC3Q9NYG2 299 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 SPG21Q9NZD8 308 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 MRPL15Q9P015 296 aaKnown RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM272A0A1B0GTI8 110 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 A0A1W2PPE3 182 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 GPR39O43194 453 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TSPAN3O60637 253 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ARL6IP5O75915 188 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 MELTFP08582 738 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 APEHP13798 732 aaKnown RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 PJVKQ0ZLH3 352 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM115Q12893 351 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 DOC2AQ14183 400 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ATPAF1Q5TC12 328 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 FAM199XQ6PEV8 388 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 ACOT7LQ6ZUV0 252 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 MUC20Q8N307 709 aaPredicted RBP11.12□□□□□ -0.63
CAPN3-221ENST00000638141 RNF175Q8N4F7 328 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TTC16Q8NEE8 873 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 OR4K1Q8NGD4 311 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 OR5J2Q8NH18 312 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 LGALS14Q8TCE9 139 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 SLC38A5Q8WUX1 472 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 EID2BQ96D98 161 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 PGLYRP3Q96LB9 341 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 CAMK1GQ96NX5 476 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 SSX3Q99909 188 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 EGLN3Q9H6Z9 239 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 SGK2Q9HBY8 427 aa11.12□□□□□ -0.63
CAPN3-221ENST00000638141 FAM86C2PA6NEL3 165 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 ACOD1A6NK06 481 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 OR6C76A6NM76 312 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 FOXE1O00358 373 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 BCAT2O15382 392 aaPredicted RBP11.11□□□□□ -0.63
CAPN3-221ENST00000638141 OR2T1O43869 369 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 TBX19O60806 448 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 NFYBP25208 207 aa11.11□□□□□ -0.63
CAPN3-221ENST00000638141 CEACAM6P40199 344 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms