RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, human

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-223	ENST00000637823	TMED7	Q9Y3B3	224 aa		10.69	□□□□□ -0.7
CLN6-223	ENST00000637823	NCKAP5	O14513	1909 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	IGKV1D-42	A0A075B6H8	117 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823		A6NL46	340 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823		B4DXG7	233 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	KPNA4	O00629	521 aa	Predicted RBP	10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	CDC42EP2	O14613	210 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	KLK10	O43240	276 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	EFS	O43281	561 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	TLX3	O43711	291 aa	Predicted RBP	10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	PTP4A3	O75365	173 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	CBR3	O75828	277 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	RCBTB2	O95199	551 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	WDPCP	O95876	746 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	GIPR	P48546	466 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	MASP1	P48740	699 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	SLC9A3	P48764	834 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	MAP2K6	P52564	334 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	NUP107	P57740	925 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	ISL1	P61371	349 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	CRYZ	Q08257	329 aa	Known RBP	10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	MFAP5	Q13361	173 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	RAPSN	Q13702	412 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	INPP5J	Q15735	1006 aa	Predicted RBP	10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	PLPPR5	Q32ZL2	321 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	TIGD3	Q6B0B8	471 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	RPL13AP3	Q6NVV1	102 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	C5orf46	Q6UWT4	87 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	ARSK	Q6UWY0	536 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	LINC00696	Q6ZRV3	163 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	KIF18B	Q86Y91	864 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	P3H2	Q8IVL5	708 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	DEPDC4	Q8N2C3	294 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	STK35	Q8TDR2	534 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	GATA6	Q92908	595 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	C1GALT1C1	Q96EU7	318 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	RNF32	Q9H0A6	362 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	PNPLA3	Q9NST1	481 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	MED17	Q9NVC6	651 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	ANKRD10	Q9NXR5	420 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	GPR83	Q9NYM4	423 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	IL20	Q9NYY1	176 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	DKK4	Q9UBT3	224 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	SPTBN2	O15020	2390 aa		10.68	□□□□□ -0.7
CLN6-223	ENST00000637823	SPTBN4	Q9H254	2564 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	MAGEA13P	A6NCF6	341 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	ENO4	A6NNW6	628 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823		A8MVM7	634 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SUSD5	O60279	629 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	HCN1	O60741	890 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SLC25A12	O75746	678 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	OR7A10	O76100	309 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SOX14	O95416	240 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	IGFBP1	P08833	259 aa	Predicted RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SAG	P10523	405 aa	Predicted RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	PTN	P21246	168 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	FKBP2	P26885	142 aa	Known RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	ADH6	P28332	368 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	EIF1	P41567	113 aa	Known RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	CCL11	P51671	97 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	DSCR4	P56555	118 aa	Predicted RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	CDC42	P60953	191 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	CDK5	Q00535	292 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	IL5RA	Q01344	420 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	EGR4	Q05215	589 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	GINS1	Q14691	196 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	OR1C1	Q15619	314 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	DEFB109B	Q30KR1	87 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	GLYR1	Q49A26	553 aa	Predicted RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	ZBED5	Q49AG3	693 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	BROX	Q5VW32	411 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SLX4IP	Q5VYV7	408 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823		Q6ZPB1	254 aa	Predicted RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	OAF	Q86UD1	273 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SLC43A2	Q8N370	569 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	TEX47	Q8TBZ9	253 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	FBLIM1	Q8WUP2	373 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	LIPH	Q8WWY8	451 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	HAS2	Q92819	552 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	ZBTB8A	Q96BR9	441 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	DTNBP1	Q96EV8	351 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SIGLEC12	Q96PQ1	595 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	EGLN3	Q9H6Z9	239 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	ZNF552	Q9H707	407 aa	Predicted RBP	10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	SLC25A19	Q9HC21	320 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	PLA2G3	Q9NZ20	509 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	FBXL2	Q9UKC9	423 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	VDAC3	Q9Y277	283 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	ZNF337	Q9Y3M9	751 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	PCDHGB5	Q9Y5G0	923 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	HRH3	Q9Y5N1	445 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	CDH10	Q9Y6N8	788 aa		10.67	□□□□□ -0.7
CLN6-223	ENST00000637823	TRAV36DV7	A0A075B6V5	113 aa		10.66	□□□□□ -0.7
CLN6-223	ENST00000637823	TMEM72	A0PK05	275 aa		10.66	□□□□□ -0.7
CLN6-223	ENST00000637823	OR5H15	A6NDH6	313 aa		10.66	□□□□□ -0.7
CLN6-223	ENST00000637823		G3V3Y1	287 aa		10.66	□□□□□ -0.7
CLN6-223	ENST00000637823	ZNF208	O43345	1280 aa		10.66	□□□□□ -0.7
CLN6-223	ENST00000637823	MPZL2	O60487	215 aa		10.66	□□□□□ -0.7
CLN6-223	ENST00000637823	NPIPB7	O75200	414 aa		10.66	□□□□□ -0.7

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