RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DCST2Q5T1A1 773 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 PGBD2Q6P3X8 592 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZAR1Q86SH2 424 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 OR4N2Q8NGD1 307 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 OR51Q1Q8NH59 317 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 FCGR1BQ92637 280 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ELF4Q99607 663 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 CNPPD1Q9BV87 410 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 MTHFD2LQ9H903 347 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 GLTPQ9NZD2 209 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 TP53BP1Q12888 1972 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 OR2B3O76000 313 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 APOC1P02654 83 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CSF3P09919 207 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ERP29P30040 261 aaKnown RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 CSF2RBP32927 897 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CNR2P34972 360 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CRISP1P54107 249 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 RGS8P57771 180 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 MFSD13AQ14CX5 517 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 PYHIN1Q6K0P9 492 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 OR4K5Q8NGD3 323 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 OR52N1Q8NH53 320 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 RIT1Q92963 219 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 NECAB3Q96P71 396 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 GPA33Q99795 319 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 SEMA4GQ9NTN9 838 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 IMPAD1Q9NX62 359 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZNF226Q9NYT6 803 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 KCNE5Q9UJ90 142 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 FAAHO00519 579 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 GNB5O14775 395 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 NSA2O95478 260 aaKnown RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 GKN3PP0CG01 181 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CD1CP29017 333 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 GRM7Q14831 915 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 GLYR1Q49A26 553 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 SLC6A19Q695T7 634 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZNF836Q6ZNA1 936 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZNF614Q8N883 585 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CDRT4Q8N9R6 151 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 PIGKQ92643 395 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 CTHRC1Q96CG8 243 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 IL4I1Q96RQ9 567 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 NUDT22Q9BRQ3 303 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 POLR2J3Q9H1A7 115 aaKnown RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 ZNF443Q9Y2A4 671 aaPredicted RBP10.63□□□□□ -0.71
CLN6-217ENST00000636964 DTX4Q9Y2E6 619 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 AUP1Q9Y679 476 aa10.63□□□□□ -0.71
CLN6-217ENST00000636964 A0A075B6Q4 140 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 A0A087WV62 115 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 CPED1A4D0V7 1026 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 CLCA1A8K7I4 914 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 HRO43593 1189 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 NUDT21O43809 227 aaKnown RBP10.62□□□□□ -0.71
CLN6-217ENST00000636964 FOLR1P15328 257 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 MMP11P24347 488 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 ARRB1P49407 418 aaPredicted RBP10.62□□□□□ -0.71
CLN6-217ENST00000636964 FAM53BQ14153 422 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PRAMEF8Q5VWM4 474 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PRAMEF7Q5VXH5 474 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PLCZ1Q86YW0 608 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PRSS58Q8IYP2 241 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 OR2I1PQ8NGU4 316 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PRRC1Q96M27 445 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 MIXL1Q9H2W2 232 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PRDM9Q9NQV7 894 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 ATXN7L1Q9ULK2 861 aaPredicted RBP10.62□□□□□ -0.71
CLN6-217ENST00000636964 A0A1W2PRG6 482 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 CLDN4O14493 209 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 HYAL3O43820 417 aaPredicted RBP10.62□□□□□ -0.71
CLN6-217ENST00000636964 CTNSO60931 367 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PDGFAP04085 211 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PRG2P13727 222 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 GLB1P16278 677 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 GABRB1P18505 474 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 S1PR1P21453 382 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 ASAH1Q13510 395 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 TSTQ16762 297 aaKnown RBP10.62□□□□□ -0.71
CLN6-217ENST00000636964 ENTPD8Q5MY95 495 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 PHC2Q8IXK0 858 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 IQCF1Q8N6M8 205 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 MARVELD3Q96A59 401 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 MCHR1Q99705 422 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 FUZQ9BT04 418 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 RNF121Q9H920 327 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 KLHL28Q9NXS3 571 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 EPHA6Q9UF33 1036 aa10.62□□□□□ -0.71
CLN6-217ENST00000636964 MRPS33Q9Y291 106 aaKnown RBP10.62□□□□□ -0.71
CLN6-217ENST00000636964 NCOR1O75376 2440 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 A0A087WUU8 490 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.61□□□□□ -0.71
CLN6-217ENST00000636964 RGS5O15539 181 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 DUX1O43812 170 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 TSC22D2O75157 780 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 STX11O75558 287 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 ADAP00813 363 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 C1QBP02746 253 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 CARD18P57730 90 aa10.61□□□□□ -0.71
CLN6-217ENST00000636964 SMIM11AP58511 58 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms