RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 NHLRC1Q6VVB1 395 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 KDM7AQ6ZMT4 941 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 WDR88Q6ZMY6 472 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 KRT77Q7Z794 578 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF410Q86VK4 478 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 RANBP3LQ86VV4 465 aaPredicted RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 PARGQ86W56 976 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 FAM228AQ86W67 206 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 SNX32Q86XE0 403 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF677Q86XU0 584 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF100Q8IYN0 542 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 BATF2Q8N1L9 274 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MTURNQ8N3F0 131 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 C14orf178Q8N769 122 aaPredicted RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 COLGALT1Q8NBJ5 622 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM185AQ8NFB2 350 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 OR10H4Q8NGA5 316 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 EXOC6Q8TAG9 804 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MGARPQ8TDB4 240 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 DNAJB3Q8WWF6 145 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 TRUB1Q8WWH5 349 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 FAF2Q96CS3 445 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 NTNG2Q96CW9 530 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC25A38Q96DW6 304 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 EEF2KMTQ96G04 330 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 C16orf74Q96GX8 76 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 VSIG2Q96IQ7 327 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 GPR137Q96N19 417 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ACCSQ96QU6 501 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 TGS1Q96RS0 853 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 CPXM1Q96SM3 734 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 COQ7Q99807 217 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MTG1Q9BT17 334 aaPredicted RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 PAXXQ9BUH6 204 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 CARD6Q9BX69 1037 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 HCAR1Q9BXC0 346 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ERVK-6Q9BXR3 956 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 NFKBIZQ9BYH8 718 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 CRNKL1Q9BZJ0 848 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 C2orf40Q9H1Z8 148 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM245Q9H330 911 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MFSD1Q9H3U5 465 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 THAP9Q9H5L6 903 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 IKZF5Q9H5V7 419 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ALG9Q9H6U8 611 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ISG20L2Q9H9L3 353 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 SLC38A10Q9HBR0 1119 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 VAT1LQ9HCJ6 419 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 POLD4Q9HCU8 107 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 PXMP2Q9NR77 195 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 DCAF13Q9NV06 445 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 DNAJC11Q9NVH1 559 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 RBM28Q9NW13 759 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF446Q9NWS9 450 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MARCH5Q9NX47 278 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ELOVL2Q9NXB9 296 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 VNN3Q9NY84 501 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 CYP39A1Q9NYL5 469 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 LHX3Q9UBR4 397 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 RPS6KB2Q9UBS0 482 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 GHRLQ9UBU3 117 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MIOXQ9UGB7 285 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 BCAP29Q9UHQ4 241 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 FZR1Q9UM11 496 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 NDRG2Q9UN36 371 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 PLA2G4CQ9UP65 541 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MOKQ9UQ07 419 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 DHRS7Q9Y394 339 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 STRAPQ9Y3F4 350 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 PPIAL4AQ9Y536 164 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 HES2Q9Y543 173 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 FLVCR1Q9Y5Y0 555 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 SLCO1B1Q9Y6L6 691 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ELP1O95163 1332 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MROH7Q68CQ1 1323 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 IGSF9BQ9UPX0 1349 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ANKRD17O75179 2603 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 SETXQ7Z333 2677 aaKnown RBP0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 MYO7BQ6PIF6 2116 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ASPMQ8IZT6 3477 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 ZNF407Q9C0G0 2248 aa0.79□□□□□ -2.28
SMARCB1-209ENST00000635578 NAV2Q8IVL1 2488 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TEP1Q99973 2627 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ANKRD11Q6UB99 2663 aaPredicted RBP0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 ITPR1Q14643 2758 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 DSCAMO60469 2012 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 NINQ8N4C6 2090 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 IGLV8-61A0A075B6I0 122 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 IGHV3-35A0A0C4DH35 117 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TRBV7-9A0A0J9YWB2 115 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SMIM28A0A1B0GU29 152 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 SPAARA0A1B0GVQ0 90 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TTC26A0AVF1 554 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TMEM89A2RUT3 159 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIM64A6NGJ6 449 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIM64BA6NI03 449 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 LOC730098B7Z3J9 87 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 TRIM49D1C9J1S8 452 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 C19orf81C9J6K1 198 aa0.78□□□□□ -2.28
SMARCB1-209ENST00000635578 LGALS8O00214 317 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms