RNA–Protein interactions for RNA: ENST00000625916.1

SCN1A-208, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 560 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-208ENST00000625916 ANKRD30BLA7E2S9 258 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 E7ESA3 106 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TOM1L1O75674 476 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 UGT2B17O75795 530 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TNFSF13O75888 250 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 BCAS2O75934 225 aaPredicted RBP1.16□□□□□ -2.22
SCN1A-208ENST00000625916 GNA14O95837 355 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 NAPAP54920 295 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TAS2R19P59542 299 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TGFBR3Q03167 851 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TIGITQ495A1 244 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 PIGGQ5H8A4 983 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 ATL3Q6DD88 541 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 ACSM5Q6NUN0 579 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 CCDC137Q6PK04 289 aaKnown RBP1.16□□□□□ -2.22
SCN1A-208ENST00000625916 UNC5DQ6UXZ4 953 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 ACOT7LQ6ZUV0 252 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 C16orf62Q7Z3J2 963 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 ANKRD37Q7Z713 158 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 LINC01561Q8N1V8 128 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 C15orf54Q8N8G6 183 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 LINC00304Q8N9R0 145 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 NKAPP1Q8N9T2 125 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 MSANTD4Q8NCY6 345 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 OR56B1Q8NGI3 324 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TCTEX1D2Q8WW35 142 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 SELENOMQ8WWX9 145 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TMEM186Q96B77 213 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 HPDLQ96IR7 371 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 ATP6V0BQ99437 205 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 TSG101Q99816 390 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 OSBPL11Q9BXB4 747 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 DUSP16Q9BY84 665 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 NAT10Q9H0A0 1025 aaKnown RBP1.16□□□□□ -2.22
SCN1A-208ENST00000625916 THAP9Q9H5L6 903 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.16□□□□□ -2.22
SCN1A-208ENST00000625916 KIF25Q9UIL4 384 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 ANAPC7Q9UJX3 599 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 FOXJ3Q9UPW0 622 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 NID2Q14112 1375 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 PLEKHH1Q9ULM0 1364 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 MUC6Q6W4X9 2439 aa1.16□□□□□ -2.22
SCN1A-208ENST00000625916 PDS5BQ9NTI5 1447 aa1.15□□□□□ -2.22
SCN1A-208ENST00000625916 A0A1B0GUL7 405 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 FAM230AA0A1W2PPH8 454 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 STX7O15400 261 aaKnown RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 MOSP00540 346 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 MT-ATP6P00846 226 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 ALPPP05187 535 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 CA3P07451 260 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 CHTF8P0CG12 524 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 ICAM2P13598 275 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 PAICSP22234 425 aaKnown RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 KIF5BP33176 963 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 BIDP55957 195 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 RAB40BQ12829 278 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 CUL1Q13616 776 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 MAPK6Q16659 721 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 SYT10Q6XYQ8 523 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 CENPUQ71F23 418 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 RABEPKQ7Z6M1 372 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 TMEM17Q86X19 198 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 RALGPS2Q86X27 583 aaPredicted RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 CBWD2Q8IUF1 395 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 SVOPLQ8N434 492 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 MINDY2Q8NBR6 621 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 OR5AU1Q8NGC0 362 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 OR51S1Q8NGJ8 323 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 FANK1Q8TC84 345 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 PNPT1Q8TCS8 783 aaKnown RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 GIMAP1Q8WWP7 306 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 SLC13A3Q8WWT9 602 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 RAPGEF5Q92565 580 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 NDRG1Q92597 394 aaKnown RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 SMARCD2Q92925 531 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 AKR1E2Q96JD6 320 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 HIST1H4GQ99525 98 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 KLHDC3Q9BQ90 382 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 GSDMCQ9BYG8 508 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 GPR61Q9BZJ8 451 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 OR11A1Q9GZK7 315 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 IFI27L2Q9H2X8 130 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 CALHM2Q9HA72 323 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 IL19Q9UHD0 177 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 NOL7Q9UMY1 257 aaKnown RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 YTHDF2Q9Y5A9 579 aaKnown RBP1.15□□□□□ -2.23
SCN1A-208ENST00000625916 V9GY05 133 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 UBE4BO95155 1302 aa1.15□□□□□ -2.23
SCN1A-208ENST00000625916 DOCK9Q9BZ29 2069 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 CARMIL1Q5VZK9 1371 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 A6NIZ1 184 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 B4GALT5O43286 388 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 PRKYO43930 277 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 RCBTB2O95199 551 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 CTDNEP1O95476 244 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 F10P00742 488 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 RBMY1CP0DJD4 496 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 CYP2B6P20813 491 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 ATP6V1B2P21281 511 aa1.14□□□□□ -2.23
SCN1A-208ENST00000625916 ANXA13P27216 316 aa1.14□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms