RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ARRB1P49407 418 aaPredicted RBP18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 EFNA3P52797 238 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 CD226Q15762 336 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 YOD1Q5VVQ6 348 aaPredicted RBP18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 ARIH2OSQ8N7S6 290 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 TMEM99Q8N816 258 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 ADIPOR1Q96A54 375 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 WDFY2Q96P53 400 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 ALG8Q9BVK2 526 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 SLC19A3Q9BZV2 496 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 EXOSC3Q9NQT5 275 aaKnown RBP18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 CHRNA9Q9UGM1 479 aa18.08■□□□□ 0.48
PCDHB11-202ENST00000624887 ARID1BQ8NFD5 2236 aaPredicted RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 SCDO00767 359 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 GAAP10253 952 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 RPS7P62081 194 aaKnown RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 GALEQ14376 348 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 KLBQ86Z14 1044 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 FAM83FQ8NEG4 500 aaPredicted RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 ZNF501Q96CX3 271 aaPredicted RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 LRFN5Q96NI6 719 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 ISG20L2Q9H9L3 353 aaKnown RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 POLE4Q9NR33 117 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 INIPQ9NRY2 104 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 ASB6Q9NWX5 421 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 HAO2Q9NYQ3 351 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 MRTO4Q9UKD2 239 aaKnown RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 COL5A1P20908 1838 aaPredicted RBP18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 CABIN1Q9Y6J0 2220 aa18.07■□□□□ 0.48
PCDHB11-202ENST00000624887 A0A1B0GX78 115 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 DAPL1A0PJW8 107 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 RGS5O15539 181 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 REM1O75628 298 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 UTS2O95399 124 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 HLA-DPB1P04440 258 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 CLEC2LP0C7M8 214 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 UBL4AP11441 157 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 GTF2E2P29084 291 aaKnown RBP18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 TGM4P49221 684 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 DCAF7P61962 342 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 PSPHP78330 225 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 CSTF1Q05048 431 aaKnown RBP18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 HNRNPA0Q13151 305 aaKnown RBP18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 SKP2Q13309 424 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 GPR50Q13585 617 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 VWA2Q5GFL6 755 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 VASNQ6EMK4 673 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 WBP2NLQ6ICG8 309 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 GATSQ8NAP1 163 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 SYT14Q8NB59 555 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 CYB561A3Q8NBI2 242 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ATP6V1C2Q8NEY4 427 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 OR5M3Q8NGP4 307 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ERMAPQ96PL5 475 aaPredicted RBP18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 DPYSL5Q9BPU6 564 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 NEURL2Q9BR09 285 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 NUDT22Q9BRQ3 303 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ZNF768Q9H5H4 540 aaKnown RBP18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 SP140LQ9H930 580 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 FGF21Q9NSA1 209 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 BABAM2Q9NXR7 383 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ADAMTS20P59510 1910 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 SLC35F4A4IF30 521 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 HTR3EA5X5Y0 456 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 SBK2P0C263 348 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 CLUP10909 449 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 SLC16A1P53985 500 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ARHGAP40Q5TG30 622 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 APOOLQ6UXV4 268 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 LRRC17Q8N6Y2 441 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 GALNT6Q8NCL4 622 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 PHOSPHO1Q8TCT1 267 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ASB15Q8WXK1 588 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 KATNB1Q9BVA0 655 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 TMED9Q9BVK6 235 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 NUDT9Q9BW91 350 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 ADGRL4Q9HBW9 690 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 PLEKHB1Q9UF11 243 aaPredicted RBP18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 TRAPPC4Q9Y296 219 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 RP1P56715 2156 aa18.06■□□□□ 0.48
PCDHB11-202ENST00000624887 OIP5O43482 229 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 PDGFBP01127 241 aaPredicted RBP18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 IGF2P01344 180 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 PNMTP11086 282 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 GALP22466 123 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 DBPQ10586 325 aaPredicted RBP18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 NSDHLQ15738 373 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 OR10H4Q8NGA5 316 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 OR14A16Q8NHC5 309 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 DAZLQ92904 295 aaKnown RBP18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 CCDC74AQ96AQ1 378 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 ART5Q96L15 291 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 TBX5Q99593 518 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 SDHCQ99643 169 aaPredicted RBP18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 CCDC32Q9BV29 185 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 FBXL4Q9UKA2 621 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 ZNF337Q9Y3M9 751 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 CMAHPQ9Y471 501 aa18.05■□□□□ 0.48
PCDHB11-202ENST00000624887 IGKV1D-42A0A075B6H8 117 aa18.04■□□□□ 0.48
PCDHB11-202ENST00000624887 C2orf92A0A1B0GVN3 265 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms