RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 CLDN6P56747 220 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ACTR1AP61163 376 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 MFGE8Q08431 387 aaPredicted RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 SNTB1Q13884 538 aaKnown RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 CYB561A3Q8NBI2 242 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 OR5T1Q8NG75 326 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SEC22CQ9BRL7 303 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 NIPSNAP3BQ9BS92 247 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ANKRD19PQ9H560 264 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 CD53P19397 219 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 NME2P22392 152 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 PSMB10P40306 273 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 LEXMQ3ZCV2 418 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 XKR7Q5GH72 579 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ENTPD8Q5MY95 495 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SLAMF9Q96A28 289 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 NIPSNAP1Q9BPW8 284 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 EXOSC3Q9NQT5 275 aaKnown RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 OR1A2Q9Y585 309 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 A0A1B0GUH1 482 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 TRIM77I1YAP6 450 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 MGMTP16455 207 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 OPRD1P41143 372 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ZNF136P52737 540 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 RAB33AQ14088 237 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 OR6T1Q8NGN1 323 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SLIRPQ9GZT3 109 aaKnown RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 ACSS1Q9NUB1 689 aaPredicted RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 A0A1B0GUL6 1792 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 CTHP32929 405 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 TAGLN2P37802 199 aaKnown RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 ZNF84P51523 738 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SELENOVP59797 346 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SIRPAP78324 504 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 GBX1Q14549 363 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 RSU1Q15404 277 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 CMTM1Q8IZ96 169 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 LNX2Q8N448 690 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 FRMD1Q8N878 549 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 OR5D14Q8NGL3 314 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ADAMTS18Q8TE60 1221 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 INTS14Q96SY0 518 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 WDR83Q9BRX9 315 aaKnown RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 SMIM3Q9BZL3 60 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 EGLN3Q9H6Z9 239 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 A4GALTQ9NPC4 353 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 PRTFDC1Q9NRG1 225 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 TUBGCP6Q96RT7 1819 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 TMEM212A6NML5 194 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 C9J4A7 227 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 FABP1P07148 127 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ARL3P36405 182 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 C19orf57Q0VDD7 668 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 YIF1BQ5BJH7 314 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 CTSL3PQ5NE16 218 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 ZNF322Q6U7Q0 402 aaPredicted RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 RBMS3Q6XE24 437 aaKnown RBP8.34□□□□□ -1.07
VCL-206ENST00000623461 ACOT7LQ6ZUV0 252 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SDR9C7Q8NEX9 313 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 OR4K17Q8NGC6 315 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 CHTF18Q8WVB6 975 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 B3GALT1Q9Y5Z6 326 aa8.34□□□□□ -1.07
VCL-206ENST00000623461 SGK494L7N484 410 aa8.34□□□□□ -1.08
VCL-206ENST00000623461 FOXE1O00358 373 aaPredicted RBP8.34□□□□□ -1.08
VCL-206ENST00000623461 CELF5Q8N6W0 485 aaKnown RBP8.34□□□□□ -1.08
VCL-206ENST00000623461 CDRT4Q8N9R6 151 aa8.34□□□□□ -1.08
VCL-206ENST00000623461 GHSRQ92847 366 aa8.34□□□□□ -1.08
VCL-206ENST00000623461 OR11A1Q9GZK7 315 aa8.34□□□□□ -1.08
VCL-206ENST00000623461 CLEC2DQ9UHP7 191 aa8.34□□□□□ -1.08
VCL-206ENST00000623461 SLC35A3Q9Y2D2 325 aa8.34□□□□□ -1.08
VCL-206ENST00000623461 DCDC2BA2VCK2 349 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 A6NIZ1 184 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 CALCBP10092 127 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ELAVL4P26378 380 aaKnown RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 RAP1BP61224 184 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 RAP1AP62834 184 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 EIF2B1Q14232 305 aaKnown RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 SMUG1Q53HV7 270 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 FCRLBQ6BAA4 426 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 HEPHL1Q6MZM0 1159 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 SBSNQ6UWP8 590 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 LINC01599Q8WXQ3 324 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 KHSRPQ92945 711 aaKnown RBP eCLIP8.33□□□□□ -1.081e-6■■■□□ 16.2
VCL-206ENST00000623461 HCAR1Q9BXC0 346 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ZNF768Q9H5H4 540 aaKnown RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 KCNS2Q9ULS6 477 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 HHLA2Q9UM44 414 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 KIAA0355O15063 1070 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 PAPLNO95428 1278 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 RHOP08100 348 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ECI1P42126 302 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 HBA1P69905 142 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TNK1Q13470 666 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 C1orf87Q8N0U7 546 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ST6GALNAC5Q9BVH7 336 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 ACOXLQ9NUZ1 547 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 TMEM100Q9NV29 134 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 PLCH1Q4KWH8 1693 aa8.33□□□□□ -1.08
VCL-206ENST00000623461 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.33□□□□□ -1.08
VCL-206ENST00000623461 RTCAO00442 366 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms