RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	RAP2B	P61225	183 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	ARHGAP19	Q14CB8	494 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MLC1	Q15049	377 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MRGPRE	Q86SM8	312 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	GID4	Q8IVV7	300 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	LINC00615	Q96LM1	132 aa	Predicted RBP	13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MED17	Q9NVC6	651 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	SYT5	O00445	386 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	B3GALNT1	O75752	331 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	CLTB	P09497	229 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	GIP	P09681	153 aa	Predicted RBP	13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	PRPF38B	Q5VTL8	546 aa	Known RBP	13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	C11orf88	Q6PI97	169 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	RFLNB	Q8N5W9	214 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	NR4A3	Q92570	626 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	CD180	Q99467	661 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	OR52D1	Q9H346	318 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MED11	Q9P086	117 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045		A0A0A6YYD5	115 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	FAM86C2P	A6NEL3	165 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	CLEC3A	O75596	197 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	SAG	P10523	405 aa	Predicted RBP	13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	ADRB3	P13945	408 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	PPP3CB	P16298	524 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MAOB	P27338	520 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	DUSP2	Q05923	314 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	DECR1	Q16698	335 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	SLC6A19	Q695T7	634 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MBOAT2	Q6ZWT7	520 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	MEPCE	Q7L2J0	689 aa	Known RBP	13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	DOK4	Q8TEW6	326 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	TMEM138	Q9NPI0	162 aa		13.31	□□□□□ -0.28
SYNRG-231	ENST00000622045	GOSR2	O14653	212 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	GAA	P10253	952 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	HIST1H1T	P22492	207 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	CERS1	P27544	350 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	NTHL1	P78549	312 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	DEFB103A	P81534	67 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	SHC2	P98077	582 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	LTB4R	Q15722	352 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	RPE65	Q16518	533 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	ARL14	Q8N4G2	192 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	OR51L1	Q8NGJ5	315 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	NKX6-2	Q9C056	277 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	ZMIZ1	Q9ULJ6	1067 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	WDR45	Q9Y484	360 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045		A0A1B0GUH1	482 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	SELENOF	O60613	162 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	FGF18	O76093	207 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	ATG12	O94817	140 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	PCDH8	O95206	1070 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	AIFM1	O95831	613 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	ACHE	P22303	614 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	PDX1	P52945	283 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	TRA2B	P62995	288 aa	Known RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	DYRK1A	Q13627	763 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	ZNF660	Q6AZW8	331 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	NIPAL3	Q6P499	406 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	TPRA1	Q86W33	373 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	BPIFC	Q8NFQ6	507 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	OR10K1	Q8NGX5	313 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	FANK1	Q8TC84	345 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	C2CD4C	Q8TF44	421 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	OR14A2	Q96R54	314 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	PLCL2	Q9UPR0	1127 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	SCAMP1	O15126	338 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	GALR3	O60755	368 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	PRDX1	Q06830	199 aa	Known RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	OR7E24	Q6IFN5	339 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	SSX6	Q7RTT6	188 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	CMIP	Q8IY22	773 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	CDK20	Q8IZL9	346 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	ELP4	Q96EB1	424 aa		13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	C7orf50	Q9BRJ6	194 aa	Known RBP	13.3	□□□□□ -0.28
SYNRG-231	ENST00000622045	UNC119B	A6NIH7	251 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	STX11	O75558	287 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	IFNGR1	P15260	489 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	TEAD1	P28347	426 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	SORD	Q00796	357 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	DCAF12L2	Q5VW00	463 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	TMEM64	Q6YI46	380 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	MTSS1L	Q765P7	747 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	FCRLA	Q7L513	359 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	SLC16A11	Q8NCK7	471 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	HAVCR2	Q8TDQ0	301 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	PAWR	Q96IZ0	340 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	ESRP2	Q9H6T0	727 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	MRPS30	Q9NP92	439 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	EXOSC3	Q9NQT5	275 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	KIAA1671	Q9BY89	1806 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	PRAF2	O60831	178 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	HIST1H2AB	P04908	130 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	MAT2A	P31153	395 aa	Known RBP	13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	H2BFS	P57053	126 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	CAMK1	Q14012	370 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	DHCR24	Q15392	516 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	HYAL4	Q2M3T9	481 aa		13.29	□□□□□ -0.28
SYNRG-231	ENST00000622045	HIST3H2A	Q7L7L0	130 aa		13.29	□□□□□ -0.28

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