RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 C3orf33Q6P1S2 294 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 STAC2Q6ZMT1 411 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 LRRC74BQ6ZQY2 392 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 FCRLAQ7L513 359 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 NUFIP2Q7Z417 695 aaKnown RBP16■□□□□ 0.15
SCAMP4-213ENST00000621748 TUSC5Q8IXB3 177 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 TMEM234Q8WY98 164 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 CNOT9Q92600 299 aaKnown RBP16■□□□□ 0.15
SCAMP4-213ENST00000621748 ZC3HAV1LQ96H79 300 aaKnown RBP16■□□□□ 0.15
SCAMP4-213ENST00000621748 SH3GL1Q99961 368 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 MYLK2Q9H1R3 596 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16■□□□□ 0.15
SCAMP4-213ENST00000621748 ZNF226Q9NYT6 803 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 EDARQ9UNE0 448 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 CORO2BQ9UQ03 480 aa16■□□□□ 0.15
SCAMP4-213ENST00000621748 TMEM247A6NEH6 219 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 AGAP5A6NIR3 686 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 AIM2O14862 343 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 PRKD3O94806 890 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 ATE1O95260 518 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 RAF1P04049 648 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 KLK2P20151 261 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 TXNL4AP83876 142 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 MAPK11Q15759 364 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 GTDC1Q4AE62 458 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 TMEM201Q5SNT2 666 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 BEND4Q6ZU67 534 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 TRPM8Q7Z2W7 1104 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 DHDDSQ86SQ9 333 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 LSRQ86X29 649 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 POU5F2Q8N7G0 328 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 GTF2H4Q92759 462 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 MBD6Q96DN6 1003 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 OR5B2Q96R09 309 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 MTHFD2LQ9H903 347 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 EXOSC3Q9NQT5 275 aaKnown RBP15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 KLHL13Q9P2N7 655 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 TAGLN3Q9UI15 199 aa15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 ING1Q9UK53 422 aaPredicted RBP15.99■□□□□ 0.15
SCAMP4-213ENST00000621748 THBDP07204 575 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 ZCCHC18P0CG32 403 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 NR2F1P10589 423 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 KEAP1Q14145 624 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 KRT72Q14CN4 511 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 REP15Q6BDI9 236 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 STK32CQ86UX6 486 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 ZNF563Q8TA94 476 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 PIK3IP1Q96FE7 263 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 AURKBQ96GD4 344 aaPredicted RBP15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 NSL1Q96IY1 281 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 TPT1P8Q9HAU6 139 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 CTPS2Q9NRF8 586 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 SERINC1Q9NRX5 453 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 NDE1Q9NXR1 346 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 MTORP42345 2549 aa15.98■□□□□ 0.15
SCAMP4-213ENST00000621748 ACANP16112 2415 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 AP3D1O14617 1153 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 SMAD9O15198 467 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 YES1P07947 543 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 ETFAP13804 333 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 RPS4Y1P22090 263 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 LOXP28300 417 aaPredicted RBP15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 APOBEC1P41238 236 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 IDH2P48735 452 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 TRMT5Q32P41 509 aaKnown RBP15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 SYT14P1Q58G82 188 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 TFAP2EQ6VUC0 442 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 TMPPEQ6ZT21 453 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 SLC43A2Q8N370 569 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 DPP10Q8N608 796 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 FITM2Q8N6M3 262 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 RCN3Q96D15 328 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 ALPK1Q96QP1 1244 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 PSD2Q9BQI7 771 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 GP6Q9HCN6 339 aa15.97■□□□□ 0.15
SCAMP4-213ENST00000621748 CLIC1O00299 241 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 CYTIPO60759 359 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 TFPTP0C1Z6 253 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 IL7RP16871 459 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 CD53P19397 219 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 CRATP43155 626 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 MAGEA8P43361 318 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 DIO1P49895 249 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 NUDT2P50583 147 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 DEFB113Q30KQ7 82 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 PAGE3Q5JUK9 113 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 FAM91A1Q658Y4 838 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 GRINAQ7Z429 371 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 ADGRG3Q86Y34 549 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 CMIPQ8IY22 773 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 WDR60Q8WVS4 1066 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 PMM1Q92871 262 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 ZNF775Q96BV0 537 aaPredicted RBP15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 DNAJA3Q96EY1 480 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 HS3ST6Q96QI5 342 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 PAIP1Q9H074 479 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 BCO1Q9HAY6 547 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 CACYBPQ9HB71 228 aaKnown RBP15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 RLIMQ9NVW2 624 aa15.96■□□□□ 0.15
SCAMP4-213ENST00000621748 THUMPD1Q9NXG2 353 aaKnown RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms