RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 KRT6AP02538 564 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 OPN1LWP04000 364 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 KRT6BP04259 564 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 DANCRP0C864 163 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 FAM157CP0CG43 387 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 HSD3B1P14060 373 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ZNF17P17021 662 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ZNF23P17027 643 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 IL32P24001 234 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 HSD3B2P26439 372 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CALRP27797 417 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 KRT6CP48668 564 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 NCBP2P52298 156 aaKnown RBP eCLIP6.97□□□□□ -1.298e-8■□□□□ 9.9
CLK1-215ENST00000621181 ACSM2AQ08AH3 577 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CSTF3Q12996 717 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 LCP2Q13094 533 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ADRM1Q16186 407 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.97□□□□□ -1.29
CLK1-215ENST00000621181 SPIN4Q56A73 249 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 INTS11Q5TA45 600 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 ACSM2BQ68CK6 577 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 GTF2IRD2BQ6EKJ0 949 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TMEM107Q6UX40 140 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CYP2R1Q6VVX0 501 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 AMIGO2Q86SJ2 522 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 GTF2IRD2Q86UP8 949 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 DHFR2Q86XF0 187 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ADGRG5Q8IZF4 528 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ZNF619Q8N2I2 560 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 MIER2Q8N344 545 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 PACRGLQ8N7B6 248 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CDYL2Q8N8U2 506 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 PAPD5Q8NDF8 572 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 LILRB1Q8NHL6 650 aaPredicted RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 CDC26Q8NHZ8 85 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CANT1Q8WVQ1 401 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 EME1Q96AY2 570 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 REXO5Q96IC2 774 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 KCNA7Q96RP8 456 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 PRPF18Q99633 342 aaKnown RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 HDHD5Q9BXW7 423 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 EBPLQ9BY08 206 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 SEMA6AQ9H2E6 1030 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TMEM185BQ9H7F4 350 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 MID1IP1Q9NPA3 183 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ACTR3BQ9P1U1 418 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CDC42EP3Q9UKI2 254 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 SNX8Q9Y5X2 465 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 FREM1Q5H8C1 2179 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 A0A087WV62 115 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 SOCS2O14508 198 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CXCL13O43927 109 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ULK1O75385 1050 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TIPRLO75663 272 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 UTS2O95399 124 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 IL33O95760 270 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 LBPP18428 481 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CDH2P19022 906 aaPredicted RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 AGTR1P30556 359 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ZNF41P51814 821 aaPredicted RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 TUBA4AP68366 448 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 PRR5P85299 388 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 CLCQ05315 142 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 BNIP2Q12982 314 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TSC22D1Q15714 1073 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 NRF1Q16656 503 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ZNF672Q499Z4 452 aaPredicted RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 VPS26BQ4G0F5 336 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TMEM201Q5SNT2 666 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 NCMAPQ5T1S8 102 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 HBMQ6B0K9 141 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 FIGNL1Q6PIW4 674 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ESPNLQ6ZVH7 1005 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 SPATA19Q7Z5L4 167 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 PCYOX1LQ8NBM8 494 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ADAMTS16Q8TE57 1224 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 C16orf78Q8WTQ4 265 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 NEUROG1Q92886 237 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 LRRC58Q96CX6 371 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TEX37Q96LM6 180 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 RHNO1Q9BSD3 238 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 ACPTQ9BZG2 426 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 GRIP2Q9C0E4 1043 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 BARX1Q9HBU1 254 aaPredicted RBP6.97□□□□□ -1.29
CLK1-215ENST00000621181 MIEF1Q9NQG6 463 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 FAIMQ9NVQ4 179 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 AIG1Q9NVV5 245 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 TMEM45AQ9NWC5 275 aa6.97□□□□□ -1.29
CLK1-215ENST00000621181 H3BSA7 217 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 UPK1AO00322 258 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 MANBAO00462 879 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 NR5A2O00482 541 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 ADAMDEC1O15204 470 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 SSX4O60224 188 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 NDUFS7O75251 213 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 SLITRK5O94991 958 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 KCNH1O95259 989 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 IDO1P14902 403 aa6.96□□□□□ -1.3
CLK1-215ENST00000621181 ADH6P28332 368 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms