RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SLC22A11Q9NSA0 550 aa9.12□□□□□ -0.95
VTA1-205ENST00000620996 SURF4O15260 269 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 YKT6O15498 198 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 CSO75390 466 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 HMGN1P05114 100 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 PAICSP22234 425 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 TGFBR2P37173 567 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 SERPINB10P48595 397 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 EBPQ15125 230 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 CDONQ4KMG0 1287 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 IGSF11Q5DX21 431 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 THSD4Q6ZMP0 1018 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 RABEPKQ7Z6M1 372 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 RNF113BQ8IZP6 322 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 POGLUT1Q8NBL1 392 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 OR51G2Q8NGK0 314 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 CEP76Q8TAP6 659 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 HTRA1Q92743 480 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 MED30Q96HR3 178 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 CRB3Q9BUF7 120 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 MND1Q9BWT6 205 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 WWTR1Q9GZV5 400 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 DDX28Q9NUL7 540 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 IL20Q9NYY1 176 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 SLC35A3Q9Y2D2 325 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 NCOR1O75376 2440 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 FAM86C2PA6NEL3 165 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 FRG2CA6NGY1 282 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 HCN1O60741 890 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 SCO1O75880 301 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 IL33O95760 270 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 NGFRP08138 427 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 MRPL3P09001 348 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 PNLIPP16233 465 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 PRKCAP17252 672 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 PTGS2P35354 604 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 RGS6P49758 472 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 EMP2P54851 167 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 PRKCDQ05655 676 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.11□□□□□ -0.95
VTA1-205ENST00000620996 KLHL22Q53GT1 634 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 OR2G6Q5TZ20 316 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 YOD1Q5VVQ6 348 aaPredicted RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 OR5M10Q6IEU7 315 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 FAM199XQ6PEV8 388 aaPredicted RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 COX15Q7KZN9 410 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 LRRC17Q8N6Y2 441 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 LSMEM1Q8N8F7 131 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 FAM98AQ8NCA5 519 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 OR9Q1Q8NGQ5 310 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 OR1N1Q8NGS0 311 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 GATAD2BQ8WXI9 593 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 HOXB13Q92826 284 aaPredicted RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 RFKQ969G6 155 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 TMEM203Q969S6 136 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 MAP6Q96JE9 813 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 SIGLEC11Q96RL6 698 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 DCSTAMPQ9H295 470 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 NEK6Q9HC98 313 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 QPCTLQ9NXS2 382 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 ZNF223Q9UK11 482 aaPredicted RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 UGT2A1Q9Y4X1 527 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 C2orf72A6NCS6 295 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 WWP2O00308 870 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 TOX3O15405 576 aaPredicted RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 ZNF264O43296 627 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 LYPD3O95274 346 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 TSPAN19P0C672 248 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 ETV5P41161 510 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 ETV1P50549 477 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 DUSP3P51452 185 aaPredicted RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 SPHARQ15513 63 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 DGUOKQ16854 277 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 LIPKQ5VXJ0 399 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 LYPD8Q6UX82 237 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 APOOLQ6UXV4 268 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 ZFP41Q8N8Y5 198 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 SGTBQ96EQ0 304 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 CDCA4Q9BXL8 241 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 HOXD1Q9GZZ0 328 aa9.11□□□□□ -0.95
VTA1-205ENST00000620996 HINT3Q9NQE9 182 aaKnown RBP9.11□□□□□ -0.95
VTA1-205ENST00000620996 RIIAD1A6NNX1 92 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 BLOC1S5-TXNDC5H3BN57 136 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 SULT1C4O75897 302 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 CLPXO76031 633 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 IGKV3-11P04433 115 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 GYPBP06028 91 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 ATF4P18848 351 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 GALNSP34059 522 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 GRK5P34947 590 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 GPR143P51810 404 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 MRPS15P82914 257 aaKnown RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 NCF4Q15080 339 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 SLC46A3Q7Z3Q1 461 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 RHBDD1Q8TEB9 315 aa9.1□□□□□ -0.95
VTA1-205ENST00000620996 ERMAPQ96PL5 475 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 C6orf62Q9GZU0 229 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 AKIRIN1Q9H9L7 192 aaPredicted RBP9.1□□□□□ -0.95
VTA1-205ENST00000620996 SEMA5BQ9P283 1151 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms