RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 RNF122Q9H9V4 155 aa16.39■□□□□ 0.21
LITAF-220ENST00000620789 KCNJ16Q9NPI9 418 aa16.39■□□□□ 0.21
LITAF-220ENST00000620789 ARL8BQ9NVJ2 186 aa16.39■□□□□ 0.21
LITAF-220ENST00000620789 TAGLN3Q9UI15 199 aa16.39■□□□□ 0.21
LITAF-220ENST00000620789 TMED7Q9Y3B3 224 aa16.39■□□□□ 0.21
LITAF-220ENST00000620789 CACNA1CQ13936 2221 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 A0A1W2PNR3 127 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 ELOVL7A1L3X0 281 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 NKX2-6A6NCS4 301 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 SYT5O00445 386 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 NDUFAB1O14561 156 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 AQP8O94778 261 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 IL18BPO95998 194 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 CRHP06850 196 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 C8BP07358 591 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 GRNP28799 593 aaKnown RBP16.38■□□□□ 0.21
LITAF-220ENST00000620789 KCNJ5P48544 419 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 MAP2K6P52564 334 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 CRYBA2P53672 197 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 RGS8P57771 180 aaPredicted RBP16.38■□□□□ 0.21
LITAF-220ENST00000620789 PSME3P61289 254 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 LIPEQ05469 1076 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 ZNF239Q16600 458 aaKnown RBP16.38■□□□□ 0.21
LITAF-220ENST00000620789 DUSP7Q16829 419 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 MICU2Q8IYU8 434 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 FITM2Q8N6M3 262 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 RELL2Q8NC24 303 aaPredicted RBP16.38■□□□□ 0.21
LITAF-220ENST00000620789 GPR32P1Q8NGA4 272 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 SLC26A7Q8TE54 656 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 RASSF5Q8WWW0 418 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 SFXN3Q9BWM7 321 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 SRXN1Q9BYN0 137 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 CHST11Q9NPF2 352 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 ABCD2Q9UBJ2 740 aa16.38■□□□□ 0.21
LITAF-220ENST00000620789 TMEM72A0PK05 275 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 ZNF208O43345 1280 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 LGI1O95970 557 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 TFPIP10646 304 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 CCNA2P20248 432 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 CD247P20963 164 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 CXCR1P25024 350 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 CLK1P49759 484 aaKnown RBP16.37■□□□□ 0.21
LITAF-220ENST00000620789 AGFG1P52594 562 aaKnown RBP16.37■□□□□ 0.21
LITAF-220ENST00000620789 RAC3P60763 192 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 TFF3Q07654 80 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 KRT72Q14CN4 511 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 LSMEM1Q8N8F7 131 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 C3orf49Q96BT1 292 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 ARHGDIGQ99819 225 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 OR11A1Q9GZK7 315 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 ALG2Q9H553 416 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 SPAG4Q9NPE6 437 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 GMPR2Q9P2T1 348 aaKnown RBP16.37■□□□□ 0.21
LITAF-220ENST00000620789 TESQ9UGI8 421 aaKnown RBP16.37■□□□□ 0.21
LITAF-220ENST00000620789 MED12LQ86YW9 2145 aa16.37■□□□□ 0.21
LITAF-220ENST00000620789 SETXQ7Z333 2677 aaKnown RBP16.37■□□□□ 0.21
LITAF-220ENST00000620789 A0A1W2PNV4 684 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 TNFSF13O75888 250 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 COL8A1P27658 744 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 HTR2AP28223 471 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 GSK3BP49841 420 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 DIO1P49895 249 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 NCALDP61601 193 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 NRF1Q16656 503 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 EEF1A1P5Q5VTE0 462 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 TMPPEQ6ZT21 453 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 OR52E4Q8NGH9 312 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 BCAS4Q8TDM0 211 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 DDIT4LQ96D03 193 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 ARL5BQ96KC2 179 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 WFDC6Q9BQY6 131 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 ZNF559Q9BR84 538 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 TRIM2Q9C040 744 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 RPS6KB2Q9UBS0 482 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 HDGFL3Q9Y3E1 203 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 ADGRG4Q8IZF6 3080 aa16.36■□□□□ 0.21
LITAF-220ENST00000620789 C19orf84I3L1E1 186 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 M0R3H8 397 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 SULT2B1O00204 365 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 IFNA14P01570 189 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 FESP07332 822 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 KDELR2P33947 212 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 CSNK2A1P68400 391 aaPredicted RBP16.35■□□□□ 0.21
LITAF-220ENST00000620789 MYBPHQ13203 477 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 GUSBP1Q15486 140 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 ATG4DQ86TL0 474 aaPredicted RBP16.35■□□□□ 0.21
LITAF-220ENST00000620789 RANBP3LQ86VV4 465 aaPredicted RBP16.35■□□□□ 0.21
LITAF-220ENST00000620789 RNF128Q8TEB7 428 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 ROBO4Q8WZ75 1007 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 GMPPAQ96IJ6 420 aaPredicted RBP16.35■□□□□ 0.21
LITAF-220ENST00000620789 PRR14Q9BWN1 585 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 TMEM181Q9P2C4 612 aa16.35■□□□□ 0.21
LITAF-220ENST00000620789 INTS1Q8N201 2190 aaKnown RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 A0A1B0GWA3 101 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 TPST2O60704 377 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 SS18L1O75177 396 aaPredicted RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 PMS2P2O95744 297 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 PLGP00747 810 aaPredicted RBP16.34■□□□□ 0.21
LITAF-220ENST00000620789 ENPP1P22413 925 aa16.34■□□□□ 0.21
LITAF-220ENST00000620789 KIR2DL2P43627 348 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms