RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ZNF232Q9UNY5 417 aa7.38□□□□□ -1.23
NEK3-209ENST00000618856 TRAPPC4Q9Y296 219 aa7.38□□□□□ -1.23
NEK3-209ENST00000618856 CAPN7Q9Y6W3 813 aa7.38□□□□□ -1.23
NEK3-209ENST00000618856 NOTCH2Q04721 2471 aa7.38□□□□□ -1.23
NEK3-209ENST00000618856 OTOGQ6ZRI0 2925 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 LOC100653049A0A140TA62 436 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 PRORSD1PA6NEY8 169 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 TMEM229AB2RXF0 380 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 C5orf58C9J3I9 102 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 MSTNO14793 375 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 MRASO14807 208 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SMAD9O15198 467 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 TPST2O60704 377 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 CYP7B1O75881 506 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 KRT34O76011 436 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 PMS2P2O95744 297 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 OPN1LWP04000 364 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 C8BP07358 591 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 GKN3PP0CG01 181 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 TACR3P29371 465 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 RYKP34925 604 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 PCGF2P35227 344 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 CCR4P51679 360 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 POLR2HP52434 150 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 MERTKQ12866 999 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SF3A3Q12874 501 aaKnown RBP eCLIP7.37□□□□□ -1.23
NEK3-209ENST00000618856 VEZF1Q14119 521 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 CAPRIN1Q14444 709 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 PDK3Q15120 406 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 RNPS1Q15287 305 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 VMACQ2NL98 169 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 TMEM176BQ3YBM2 270 aaPredicted RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 GLIPR1L2Q4G1C9 344 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 RABL3Q5HYI8 236 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 PDSS1Q5T2R2 415 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 FAM91A1Q658Y4 838 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 WBP2NLQ6ICG8 309 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 VWA1Q6PCB0 445 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 HACD2Q6Y1H2 254 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 TMPPEQ6ZT21 453 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 BTLAQ7Z6A9 289 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 ATG4DQ86TL0 474 aaPredicted RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 MTDHQ86UE4 582 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 GCNT2Q8N0V5 402 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 ANKS4BQ8N8V4 417 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 PCYOX1LQ8NBM8 494 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 OR6K3Q8NGY3 331 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 OR10A6Q8NH74 314 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SMPDL3BQ92485 455 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 C3orf49Q96BT1 292 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 REXO5Q96IC2 774 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 WFDC6Q9BQY6 131 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SLC39A3Q9BRY0 314 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SPATA5L1Q9BVQ7 753 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 POTEKPQ9BYX7 375 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 ARMC7Q9H6L4 198 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 BCO1Q9HAY6 547 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 TIGARQ9NQ88 270 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SERINC1Q9NRX5 453 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 KCNN3Q9UGI6 736 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 PACSIN3Q9UKS6 424 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 MCTS1Q9ULC4 181 aaKnown RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 HDGFL3Q9Y3E1 203 aa7.37□□□□□ -1.23
NEK3-209ENST00000618856 SPIN1Q9Y657 262 aaPredicted RBP7.37□□□□□ -1.23
NEK3-209ENST00000618856 IGKV3D-15A0A087WSY6 115 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 TMED7-TICAM2A0A0A6YYA0 188 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 A0A1W2PNR3 127 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 TMEM72A0PK05 275 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 CYTIPO60759 359 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 FMO6PO60774 539 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 SHOX2O60902 331 aaPredicted RBP7.36□□□□□ -1.23
NEK3-209ENST00000618856 SERPINB7O75635 380 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 LGI1O95970 557 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 IMPDH2P12268 514 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 COX4I1P13073 169 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 COX6B1P14854 86 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 UQCRBP14927 111 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 CD247P20963 164 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ENPP1P22413 925 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 HTR2AP28223 471 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 PRDX6P30041 224 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 AGTR1P30556 359 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 SFTPDP35247 375 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 KCNJ5P48544 419 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 DIO1P49895 249 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 SLC16A1P53985 500 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 GNGT1P63211 74 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 DMTNQ08495 405 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 MYBPHQ13203 477 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 DAZAP2Q15038 168 aaPredicted RBP7.36□□□□□ -1.23
NEK3-209ENST00000618856 SGCBQ16585 318 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 NRF1Q16656 503 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 DUSP7Q16829 419 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 GTF2IRD2BQ6EKJ0 949 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ABLIM2Q6H8Q1 611 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 ZNF474Q6S9Z5 364 aaPredicted RBP7.36□□□□□ -1.23
NEK3-209ENST00000618856 LINC00114Q6XXX2 140 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 MEX3BQ6ZN04 569 aaKnown RBP7.36□□□□□ -1.23
NEK3-209ENST00000618856 P4HA3Q7Z4N8 544 aa7.36□□□□□ -1.23
NEK3-209ENST00000618856 PATL1Q86TB9 770 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms