RNA–Protein interactions for RNA: ENST00000618700.4

UPF3A-211, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 1,210 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-211ENST00000618700 ADGRG5Q8IZF4 528 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 LILRA2Q8N149 483 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 SLC25A43Q8WUT9 341 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-211ENST00000618700 SMPDL3BQ92485 455 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 SLC47A1Q96FL8 570 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 ADGRG7Q96K78 797 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 PRRC1Q96M27 445 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 MAGIXQ9H6Y5 334 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 TMEM185BQ9H7F4 350 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 SERINC1Q9NRX5 453 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 NDUFAF4Q9P032 175 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 ACAD8Q9UKU7 415 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 A4GNTQ9UNA3 340 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 SPIN1Q9Y657 262 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-211ENST00000618700 ZGRF1Q86YA3 2104 aa17.75■□□□□ 0.43
UPF3A-211ENST00000618700 TCRBV3S1A0A5B6 114 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 TMEM72A0PK05 275 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 FFAR1O14842 300 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 ZNF208O43345 1280 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 CHP2O43745 196 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 PRSS23O95084 383 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 PNMTP11086 282 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 ABOP16442 354 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 MAGEA2P43356 314 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 MAP2K6P52564 334 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 CDH12P55289 794 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 CLDN20P56880 219 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 IGFBP7Q16270 282 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 EMC4Q5J8M3 183 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 WLSQ5T9L3 541 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 C1orf146Q5VVC0 180 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 PM20D2Q8IYS1 436 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 OFCC1Q8IZS5 231 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 SLC38A4Q969I6 547 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 SLC41A3Q96GZ6 507 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 KLHL15Q96M94 604 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 IL1RAPQ9NPH3 570 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 PNPLA3Q9NST1 481 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 STOML1Q9UBI4 398 aa17.74■□□□□ 0.43
UPF3A-211ENST00000618700 H0YC42 278 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 J3KTA2 159 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 CIB2O75838 187 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 TPOP07202 933 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 THRBP10828 461 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 CXCR1P25024 350 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 FKBP2P26885 142 aaKnown RBP17.73■□□□□ 0.43
UPF3A-211ENST00000618700 SUCLG1P53597 346 aaKnown RBP17.73■□□□□ 0.43
UPF3A-211ENST00000618700 TPD52P55327 224 aaPredicted RBP17.73■□□□□ 0.43
UPF3A-211ENST00000618700 TAS2R41P59536 307 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 GTF3C1Q12789 2109 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 PIN1Q13526 163 aaPredicted RBP17.73■□□□□ 0.43
UPF3A-211ENST00000618700 GXYLT1Q4G148 440 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 SYT14P1Q58G82 188 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 ESPNLQ6ZVH7 1005 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 GDF7Q7Z4P5 450 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 CD163Q86VB7 1156 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 SPATA24Q86W54 205 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 UBQLNLQ8IYU4 475 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 OR5M9Q8NGP3 310 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 ZNF300Q96RE9 604 aaPredicted RBP17.73■□□□□ 0.43
UPF3A-211ENST00000618700 SEPHS2Q99611 448 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 SLC7A7Q9UM01 511 aa17.73■□□□□ 0.43
UPF3A-211ENST00000618700 IGKV1D-42A0A075B6H8 117 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 A0A087WUJ7 227 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 DHRS12A0PJE2 317 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ELOA3DA6NLF2 546 aaPredicted RBP17.72■□□□□ 0.43
UPF3A-211ENST00000618700 GJE1A6NN92 205 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 hCG_2039718K7EN88 272 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ADAMDEC1O15204 470 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 SEC14L5O43304 696 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 NPIPB7O75200 414 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 OPN1LWP04000 364 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 FABP3P05413 133 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 GPIP06744 558 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 NQO1P15559 274 aaKnown RBP17.72■□□□□ 0.43
UPF3A-211ENST00000618700 RHCEP18577 417 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 CCNA2P20248 432 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 SFTPDP35247 375 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 YAP1P46937 504 aaKnown RBP17.72■□□□□ 0.43
UPF3A-211ENST00000618700 CCNIQ14094 377 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ELOA3BQ3SY89 546 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 TMEM176BQ3YBM2 270 aaPredicted RBP17.72■□□□□ 0.43
UPF3A-211ENST00000618700 LINC00114Q6XXX2 140 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 WDR88Q6ZMY6 472 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 PIWIL3Q7Z3Z3 882 aaKnown RBP17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ADGRE4PQ86SQ3 457 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ZDHHC21Q8IVQ6 265 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 MEIOBQ8N635 442 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ATP6V1C2Q8NEY4 427 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ELOA3Q8NG57 546 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 CANT1Q8WVQ1 401 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 PRSS27Q9BQR3 290 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 ZNF426Q9BUY5 554 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 OR11A1Q9GZK7 315 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 COQ10BQ9H8M1 238 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 SELENONQ9NZV5 590 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 RIMS3Q9UJD0 308 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 CAMK2AQ9UQM7 478 aa17.72■□□□□ 0.43
UPF3A-211ENST00000618700 A0A0J9YW62 118 aa17.71■□□□□ 0.43
UPF3A-211ENST00000618700 ZC3H12DA2A288 527 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms