RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 MED20Q9H944 212 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 CNTRLQ7Z7A1 2325 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 HBP1O60381 514 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 MPIP34949 423 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 RPS27AP62979 156 aaKnown RBP11.42□□□□□ -0.58
MATR3-227ENST00000618441 UBA52P62987 128 aaKnown RBP11.42□□□□□ -0.58
MATR3-227ENST00000618441 EFEMP1Q12805 493 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 GRB14Q14449 540 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 ZDHHC20Q5W0Z9 365 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 B3GNTL1Q67FW5 361 aaPredicted RBP11.42□□□□□ -0.58
MATR3-227ENST00000618441 NAXDQ8IW45 347 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 ZNF561Q8N587 486 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 ZNF615Q8N8J6 731 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 OR4K5Q8NGD3 323 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 LGALS14Q8TCE9 139 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 TSPAN10Q9H1Z9 355 aaPredicted RBP11.42□□□□□ -0.58
MATR3-227ENST00000618441 LANCL2Q9NS86 450 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 OPN4Q9UHM6 478 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 CRLS1Q9UJA2 301 aa11.42□□□□□ -0.58
MATR3-227ENST00000618441 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
MATR3-227ENST00000618441 EVPLQ92817 2033 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 DBX1A6NMT0 343 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 PHYHO14832 338 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 PRAF2O60831 178 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 UBL3O95164 117 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ATXN1LP0C7T5 689 aaKnown RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 PYCR1P32322 319 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 CD80P33681 288 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 RBP2P50120 134 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 RNF144AP50876 292 aaPredicted RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 EPHA4P54764 986 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 SNRPGP62308 76 aaKnown RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 ECH1Q13011 328 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ZNF311Q5JNZ3 666 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 PLA2G15Q8NCC3 412 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 BBS1Q8NFJ9 593 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 SMOC1Q9H4F8 434 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 POPDC3Q9HBV1 291 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 SLC13A4Q9UKG4 626 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 FBXW2Q9UKT8 454 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 SF3B6Q9Y3B4 125 aaKnown RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 NOP16Q9Y3C1 178 aaKnown RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 CCL27Q9Y4X3 112 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 SPTBP11277 2137 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 A0A0B4J2A0 478 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 TMEM82A0PJX8 343 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ZNF705GA8MUZ8 300 aaPredicted RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 HNF1AP20823 631 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 LPOP22079 712 aaPredicted RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 NME2P22392 152 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 CERS1P27544 350 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 LIM2P55344 173 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 E2F1Q01094 437 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 PCBP2Q15366 365 aaKnown RBP eCLIP11.41□□□□□ -0.583e-6■■■■□ 20.3
MATR3-227ENST00000618441 KDF1Q8NAX2 398 aaPredicted RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 OR9A2Q8NGT5 310 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 XAGE5Q8WWM1 108 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 FCAMRQ8WWV6 532 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ASB8Q9H765 288 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 WSB2Q9NYS7 404 aaPredicted RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 SHPKQ9UHJ6 478 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 C13orf42A0A1B0GVH6 325 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 C5orf52A6NGY3 159 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ACP2P11117 423 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 MAT1AQ00266 395 aaKnown RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 ILKQ13418 452 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 GAMTQ14353 236 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 SBSNQ6UWP8 590 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 OR51Q1Q8NH59 317 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 CASTOR1Q8WTX7 329 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 DVL3Q92997 716 aaPredicted RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 AMDHD1Q96NU7 426 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 CITED1Q99966 193 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ISYNA1Q9NPH2 558 aa11.41□□□□□ -0.58
MATR3-227ENST00000618441 ZNF638Q14966 1978 aaKnown RBP11.41□□□□□ -0.58
MATR3-227ENST00000618441 SCN1AP35498 2009 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 EEF1E1-BLOC1S5C9J1V9 151 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 PRODHO43272 600 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 RNF13O43567 381 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 LILRB5O75023 590 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 ACTL6AO96019 429 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 SNRPCP09234 159 aaKnown RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 STXBP1P61764 594 aaKnown RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 HBA1P69905 142 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 OR8G1Q15617 311 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 TMEM201Q5SNT2 666 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 YOD1Q5VVQ6 348 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 AFMIDQ63HM1 303 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FRG2Q64ET8 278 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 GLDNQ6ZMI3 551 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 INO80EQ8NBZ0 244 aaPredicted RBP11.4□□□□□ -0.58
MATR3-227ENST00000618441 SLC7A13Q8TCU3 470 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FRG2BQ96QU4 278 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 RASL12Q9NYN1 266 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 HSBP1L1C9JCN9 74 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 SOCS6O14544 535 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 FRS3O43559 492 aa11.4□□□□□ -0.58
MATR3-227ENST00000618441 CNOT4O95628 575 aaKnown RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms