RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 PITX2Q99697 317 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 ABCG5Q9H222 651 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PTTG1O95997 202 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 IL7P13232 177 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SNRPBP14678 240 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 GFERP55789 205 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 SPERTQ8NA61 448 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 OR4N2Q8NGD1 307 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 OR2T4Q8NH00 348 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 BAHD1Q8TBE0 780 aaPredicted RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 PLA2G12AQ9BZM1 189 aa8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 DIMT1Q9UNQ2 313 aaKnown RBP8.27□□□□□ -1.09
PDLIM5-222ENST00000615540 ACOD1A6NK06 481 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SMLR1H3BR10 107 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC16A7O60669 478 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CD3GP09693 182 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 UCHL1P09936 223 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CLUP10909 449 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GABRG2P18507 467 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 VAMP1P23763 118 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ZFP36L2P47974 494 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 RELAQ04206 551 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ATXN7L3Q14CW9 347 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CDNFQ49AH0 187 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 P4HA3Q7Z4N8 544 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC7A5P1Q8MH63 180 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 PNLDC1Q8NA58 520 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 FAM210AQ96ND0 272 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 THAP7Q9BT49 309 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 BABAM2Q9NXR7 383 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 MRPS2Q9Y399 296 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SIT1Q9Y3P8 196 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 TP53I11O14683 189 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 KCNK2O95069 426 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GNG2P59768 71 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CRMP1Q14194 572 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 PRAMEF20Q5VT98 475 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 UBE2UQ5VVX9 321 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CEP76Q8TAP6 659 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 DUSP19Q8WTR2 217 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 YIPF6Q96EC8 236 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SDF2Q99470 211 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ASB6Q9NWX5 421 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 EPHA6Q9UF33 1036 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CACNG2Q9Y698 323 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 A6NL46 340 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GOSR2O14653 212 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC35E2P0CK97 266 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 OR8G3PP0DMU2 310 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CD1CP29017 333 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GRK5P34947 590 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ART1P52961 327 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GLT8D1Q68CQ7 371 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 NANOGP1Q8N7R0 232 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SIMC1Q8NDZ2 872 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 TSLPQ969D9 159 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF775Q96BV0 537 aaPredicted RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CCDC120Q96HB5 630 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.26□□□□□ -1.093e-8■■■□□ 14.8
PDLIM5-222ENST00000615540 UBQLN4Q9NRR5 601 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SIDT1Q9NXL6 827 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 NOP16Q9Y3C1 178 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 DOCK3Q8IZD9 2030 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 A0A087WUU8 490 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 BRINP1O60477 761 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 PRAMEF4O60810 478 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GABRA5P31644 462 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 OR3A3P47888 321 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 OR3A2P47893 321 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 EMP2P54851 167 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 C1orf53Q5VUE5 145 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 PRAMEF9Q5VWM5 478 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 LRRC18Q8N456 261 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 OR13C5Q8NGS8 318 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 OR14L1PQ8NHC6 308 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 IRF2BPLQ9H1B7 796 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 B3GAT2Q9NPZ5 323 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 MED11Q9P086 117 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC22A7Q9Y694 548 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 DCDC2BA2VCK2 349 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ZAR1LA6NP61 321 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 GPX5O75715 221 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 FUCA1P04066 466 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 VWA2Q5GFL6 755 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 AWAT2Q6E213 333 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 PM20D2Q8IYS1 436 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 PGAM5Q96HS1 289 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 METTL8Q9H825 291 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ISG20L2Q9H9L3 353 aaKnown RBP8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 SLAMF7Q9NQ25 335 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 CORINQ9Y5Q5 1042 aa8.26□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF264O43296 627 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 EML2O95834 649 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 FPR3P25089 353 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 HTR1FP30939 366 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 SMCO1Q147U7 214 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 XAF1Q6GPH4 301 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 LRRC61Q9BV99 259 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 INIPQ9NRY2 104 aa8.25□□□□□ -1.09
PDLIM5-222ENST00000615540 C2orf42Q9NWW7 574 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms