RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 TMEM45AQ9NWC5 275 aa16.18■□□□□ 0.18
VCX3A-203ENST00000612369 TRAPPC4Q9Y296 219 aa16.18■□□□□ 0.18
VCX3A-203ENST00000612369 DSPPQ9NZW4 1301 aa16.18■□□□□ 0.18
VCX3A-203ENST00000612369 IGKV3D-15A0A087WSY6 115 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 CFAP73A6NFT4 308 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 HMGB1P1B2RPK0 211 aaPredicted RBP16.17■□□□□ 0.18
VCX3A-203ENST00000612369 ZNF208O43345 1280 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 ADAM11O75078 769 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 CNOT4O95628 575 aaKnown RBP16.17■□□□□ 0.18
VCX3A-203ENST00000612369 FESP07332 822 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 ETFAP13804 333 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 KLK2P20151 261 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 SLC1A3P43003 542 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 IDH3AP50213 366 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 POLR2HP52434 150 aaKnown RBP16.17■□□□□ 0.18
VCX3A-203ENST00000612369 ITGADQ13349 1161 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 LIN52Q52LA3 116 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 TTMPQ5BVD1 217 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 MRPL2Q5T653 305 aaKnown RBP16.17■□□□□ 0.18
VCX3A-203ENST00000612369 C20orf204Q6ZNR8 217 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 Q6ZT83 130 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 HDXQ7Z353 690 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 GALNT5Q7Z7M9 940 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 OR52P1PQ8NH57 321 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 SLC38A5Q8WUX1 472 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 DDIT4LQ96D03 193 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 VIPAS39Q9H9C1 493 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 SLCO1B3Q9NPD5 702 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 ARGLU1Q9NWB6 273 aaPredicted RBP16.17■□□□□ 0.18
VCX3A-203ENST00000612369 EMC3Q9P0I2 261 aa16.17■□□□□ 0.18
VCX3A-203ENST00000612369 TMED7-TICAM2A0A0A6YYA0 188 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 A0A0G2JPF8 293 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.16■□□□□ 0.18
VCX3A-203ENST00000612369 CDHR4A6H8M9 788 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 HNRNPCL2B2RXH8 293 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 HNRNPCL3B7ZW38 293 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 AP3D1O14617 1153 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 HNRNPCL1O60812 293 aaKnown RBP16.16■□□□□ 0.18
VCX3A-203ENST00000612369 THBS1P07996 1170 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 HNRNPCL4P0DMR1 293 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 IL32P24001 234 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 ADAM8P78325 824 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 EPS8Q12929 822 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 FADDQ13158 208 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 ABLIM2Q6H8Q1 611 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 SSX8Q7RTT4 187 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 LRRC75A-AS1Q8N1F1 130 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 PIGXQ8TBF5 258 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 HSD17B8Q92506 261 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 KISS1RQ969F8 398 aaPredicted RBP16.16■□□□□ 0.18
VCX3A-203ENST00000612369 ARL5BQ96KC2 179 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 HS3ST6Q96QI5 342 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 PAIP1Q9H074 479 aaKnown RBP16.16■□□□□ 0.18
VCX3A-203ENST00000612369 ARMC7Q9H6L4 198 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 CACYBPQ9HB71 228 aaKnown RBP16.16■□□□□ 0.18
VCX3A-203ENST00000612369 NGBQ9NPG2 151 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 INTS9Q9NV88 658 aaKnown RBP16.16■□□□□ 0.18
VCX3A-203ENST00000612369 TMEM181Q9P2C4 612 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 OSGIN1Q9UJX0 560 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 ZNF232Q9UNY5 417 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 TMED7Q9Y3B3 224 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 PCDHB14Q9Y5E9 798 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 FREM1Q5H8C1 2179 aa16.16■□□□□ 0.18
VCX3A-203ENST00000612369 ZNF814B7Z6K7 855 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 CLIC1O00299 241 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 GPR171O14626 319 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 EIF1BO60739 113 aaKnown RBP16.15■□□□□ 0.18
VCX3A-203ENST00000612369 ADAP00813 363 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 BCHEP06276 602 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 FOSL1P15407 271 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 HOXC12P31275 282 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 AQP5P55064 265 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 LARS2Q15031 903 aaKnown RBP16.15■□□□□ 0.18
VCX3A-203ENST00000612369 RGNQ15493 299 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 GTDC1Q4AE62 458 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 RNF220Q5VTB9 566 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 PRAMEF8Q5VWM4 474 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 PRAMEF7Q5VXH5 474 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 SHEQ5VZ18 495 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 BLOC1S3Q6QNY0 202 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 WFDC8Q8IUA0 241 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 S100PBPQ96BU1 408 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 AURKBQ96GD4 344 aaPredicted RBP16.15■□□□□ 0.18
VCX3A-203ENST00000612369 ZNF300Q96RE9 604 aaPredicted RBP16.15■□□□□ 0.18
VCX3A-203ENST00000612369 ADAM19Q9H013 955 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 UBTD1Q9HAC8 227 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 IFT52Q9Y366 437 aa16.15■□□□□ 0.18
VCX3A-203ENST00000612369 MTORP42345 2549 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 A0A096LPI6 279 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 ZNF716A6NP11 495 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 BMP2P12643 396 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 TACR3P29371 465 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 ATP4BP51164 291 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 SLC16A1P53985 500 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 FOXD4Q12950 439 aaPredicted RBP16.14■□□□□ 0.17
VCX3A-203ENST00000612369 LRIF1Q5T3J3 769 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 SLC2A7Q6PXP3 512 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 ZNF836Q6ZNA1 936 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 VRK2Q86Y07 508 aa16.14■□□□□ 0.17
VCX3A-203ENST00000612369 ZNF100Q8IYN0 542 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms