RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ALG10Q5BKT4 473 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 FAM27D1Q5T7N8 215 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ZNF770Q6IQ21 691 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 SLC29A4Q7RTT9 530 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 SPRED2Q7Z698 418 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 KIAA0907Q7Z7F0 614 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 KIF18BQ86Y91 864 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ZNF440Q8IYI8 595 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ELMOD2Q8IZ81 293 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 OR2T4Q8NH00 348 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 OR8S1Q8NH09 359 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 MYADMQ96S97 322 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 NMNAT3Q96T66 252 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 GPA33Q99795 319 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ARHGDIGQ99819 225 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 MGAT4CQ9UBM8 478 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 CHST2Q9Y4C5 530 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 A0A1W2PPV9 198 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ACOD1A6NK06 481 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 KDM4EB2RXH2 506 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 SOX1O00570 391 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 HRO43593 1189 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 SCO2O43819 266 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 AHSA1O95433 338 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ADAM8P78325 824 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 GALEQ14376 348 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ARHGAP40Q5TG30 622 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ZNF613Q6PF04 617 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TMED4Q7Z7H5 227 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 OR6F1Q8NGZ6 308 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 OR5AK2Q8NH90 309 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 WDFY2Q96P53 400 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 WFDC6Q9BQY6 131 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TMEM43Q9BTV4 400 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 CMC2Q9NRP2 79 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 POT1Q9NUX5 634 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ABRACLQ9P1F3 81 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 KLHL9Q9P2J3 617 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TMEM14AQ9Y6G1 99 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ANKRD36A6QL64 1941 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 VWA8A3KMH1 1905 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 H3BQ06 376 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 MAGEB4O15481 346 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 PLGP00747 810 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 MAOBP27338 520 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 HCCSP53701 268 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 RAB38P57729 211 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 UBXN2BQ14CS0 331 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 ELOCQ15369 112 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 C1orf53Q5VUE5 145 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 USP53Q70EK8 1073 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 PAQR7Q86WK9 346 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 GKN2Q86XP6 184 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 SIRT6Q8N6T7 355 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 AVL9Q8NBF6 648 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 MORN4Q8NDC4 146 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 CEP76Q8TAP6 659 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 OR14A2Q96R54 314 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 CDCA3Q99618 268 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 ELL3Q9HB65 397 aaPredicted RBP8.04□□□□□ -1.12
LIG4-204ENST00000611712 RDH8Q9NYR8 311 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 PFDN2Q9UHV9 154 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 TBC1D24Q9ULP9 559 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 SLC22A7Q9Y694 548 aa8.04□□□□□ -1.12
LIG4-204ENST00000611712 PRAMEF26H0Y7S4 382 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CHP2O43745 196 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 RFPL3O75679 317 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PROS1P07225 676 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 FBXO45P0C2W1 286 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 OR2T7P0C7T2 308 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CLDN12P56749 244 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 FCN2Q15485 313 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 VASH1Q7L8A9 365 aaPredicted RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 SYT9Q86SS6 491 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CCDC28AQ8IWP9 274 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PRR22Q8IZ63 422 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 ARL14Q8N4G2 192 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TP53I13Q8NBR0 393 aaPredicted RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 OR2T27Q8NH04 317 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 HHIPQ96QV1 700 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 S100A13Q99584 98 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 EXO5Q9H790 373 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 PLSCR3Q9NRY6 295 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 UPB1Q9UBR1 384 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 CBLCQ9ULV8 474 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 C17orf105B2RV13 164 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 FABP7O15540 132 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 F13BP05160 661 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 DRD1P21728 446 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 FGF9P31371 208 aaPredicted RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 LIMS1P48059 325 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 SRP9P49458 86 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 OR10A3P58181 314 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 GPR50Q13585 617 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 GPR176Q14439 515 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 GRM7Q14831 915 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 TMEM196Q5HYL7 178 aa8.03□□□□□ -1.12
LIG4-204ENST00000611712 RPL22L1Q6P5R6 122 aaKnown RBP8.03□□□□□ -1.12
LIG4-204ENST00000611712 FCRLAQ7L513 359 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms