RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 ZMYND19Q96E35 227 aaPredicted RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 KLHL15Q96M94 604 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 C7orf50Q9BRJ6 194 aaKnown RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 B3GNT4Q9C0J1 378 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 MS4A7Q9GZW8 240 aaPredicted RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 CXXC1Q9P0U4 656 aaPredicted RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 KCNE5Q9UJ90 142 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 PCDHGA9Q9Y5G4 932 aaKnown RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 DUXAA6NLW8 204 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 RCBTB2O95199 551 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 LYPD3O95274 346 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 ADH1AP07327 375 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 ADH5P11766 374 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 CTRB1P17538 263 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 P2RY2P41231 377 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 KRT33BQ14525 404 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 TMEM52BQ4KMG9 183 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 MRPL2Q5T653 305 aaKnown RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 CTRB2Q6GPI1 263 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 TMEM81Q6P7N7 255 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 RANBP3LQ86VV4 465 aaPredicted RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 SLITRK4Q8IW52 837 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 UXS1Q8NBZ7 420 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 MOSPD2Q8NHP6 518 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 ELMOD3Q96FG2 381 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 MEPEQ9NQ76 525 aaPredicted RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 WSB2Q9NYS7 404 aaPredicted RBP15.65■□□□□ 0.1
TNIP1-220ENST00000610535 PIPOXQ9P0Z9 390 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 MGAT4CQ9UBM8 478 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 KCNMB2Q9Y691 235 aa15.65■□□□□ 0.1
TNIP1-220ENST00000610535 MYO9BQ13459 2157 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 PROS1P07225 676 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 CLDN12P56749 244 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 RPS11P62280 158 aaKnown RBP eCLIP15.64■□□□□ 0.09
TNIP1-220ENST00000610535 NHLRC3Q5JS37 347 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 SFRP5Q5T4F7 317 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 ADAMTSL4Q6UY14 1074 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 RAB42Q8N4Z0 105 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 PELI1Q96FA3 418 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 REG4Q9BYZ8 158 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 ZCCHC4Q9H5U6 513 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 CACYBPQ9HB71 228 aaKnown RBP15.64■□□□□ 0.09
TNIP1-220ENST00000610535 NPDC1Q9NQX5 325 aaPredicted RBP15.64■□□□□ 0.09
TNIP1-220ENST00000610535 MBNL1Q9NR56 388 aaKnown RBP15.64■□□□□ 0.09
TNIP1-220ENST00000610535 DNAJB6O75190 326 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 STX11O75558 287 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 NAA10P41227 235 aaPredicted RBP15.64■□□□□ 0.09
TNIP1-220ENST00000610535 ID2Q02363 134 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 GARNL3Q5VVW2 1013 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 APOOLQ6UXV4 268 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 HDDC2Q7Z4H3 204 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 SHISA5Q8N114 240 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 FAM98AQ8NCA5 519 aaKnown RBP15.64■□□□□ 0.09
TNIP1-220ENST00000610535 LHFPL5Q8TAF8 219 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 GRHL3Q8TE85 626 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 CXorf58Q96LI9 332 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 TNFRSF13CQ96RJ3 184 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 PPA2Q9H2U2 334 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 SDHAF2Q9NX18 166 aa15.64■□□□□ 0.09
TNIP1-220ENST00000610535 hCG_1807616A0A1W2PRN6 198 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 TGM6O95932 706 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 PSMB10P40306 273 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 DUSP8Q13202 625 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 ELAVL3Q14576 367 aaKnown RBP15.63■□□□□ 0.09
TNIP1-220ENST00000610535 CEBPEQ15744 281 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 ARHGAP11BQ3KRB8 267 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 TRMT12Q53H54 448 aaKnown RBP15.63■□□□□ 0.09
TNIP1-220ENST00000610535 STPG1Q5TH74 334 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 C3P1Q6ZMU1 363 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 NRROSQ86YC3 692 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 OR2L3Q8NG85 312 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 MS4A4EQ96PG1 132 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 SLC25A18Q9H1K4 315 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 MID1O15344 667 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 SERPINI2O75830 405 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 LAMP2P13473 410 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 ANXA7P20073 488 aaKnown RBP15.63■□□□□ 0.09
TNIP1-220ENST00000610535 ZMYND11Q15326 602 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 CDK20Q8IZL9 346 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 OR52E1Q8NGJ3 308 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 C10orf90Q96M02 699 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 SARGQ9BW04 601 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 ANKRD10Q9NXR5 420 aa15.63■□□□□ 0.09
TNIP1-220ENST00000610535 TP53BP1Q12888 1972 aaPredicted RBP15.63■□□□□ 0.09
TNIP1-220ENST00000610535 TBC1D3KA0A087X1G2 549 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 TRBV2A0A0J9YWF9 115 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 PLSCR5A0PG75 271 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 TBC1D3BA6NDS4 549 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 TBC1D3FA6NER0 549 aaPredicted RBP15.62■□□□□ 0.09
TNIP1-220ENST00000610535 OTOL1A6NHN0 477 aaPredicted RBP15.62■□□□□ 0.09
TNIP1-220ENST00000610535 LGALS8O00214 317 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 ARL6IP5O75915 188 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 ATP1B1P05026 303 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 MAT2AP31153 395 aaKnown RBP15.62■□□□□ 0.09
TNIP1-220ENST00000610535 GBX2P52951 348 aaPredicted RBP15.62■□□□□ 0.09
TNIP1-220ENST00000610535 SIRPAP78324 504 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 CDK5R1Q15078 307 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 TBC1D3GQ6DHY5 549 aa15.62■□□□□ 0.09
TNIP1-220ENST00000610535 FAM199XQ6PEV8 388 aaPredicted RBP15.62■□□□□ 0.09
TNIP1-220ENST00000610535 RNF113BQ8IZP6 322 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms