RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 SQLEQ14534 574 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PRAMEF8Q5VWM4 474 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PRAMEF7Q5VXH5 474 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 SLC2A7Q6PXP3 512 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 BLOC1S3Q6QNY0 202 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 SSX8Q7RTT4 187 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 GALNT5Q7Z7M9 940 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF100Q8IYN0 542 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PIGXQ8TBF5 258 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 SLC38A5Q8WUX1 472 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 GTF2H4Q92759 462 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 KISS1RQ969F8 398 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PIGTQ969N2 578 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 SIKE1Q9BRV8 207 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 NAA11Q9BSU3 229 aaPredicted RBP12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 LIME1Q9H400 295 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 TMEM181Q9P2C4 612 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 TRAPPC4Q9Y296 219 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 TMED7Q9Y3B3 224 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 PCDHB14Q9Y5E9 798 aa12.83□□□□□ -0.36
PKNOX1-210ENST00000607049 CDHR4A6H8M9 788 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 CLDN24A6NM45 220 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 EVPLLA8MZ36 301 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 CNOT4O95628 575 aaKnown RBP12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 H2AFXP16104 143 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 CCNA2P20248 432 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 RPS4Y1P22090 263 aaKnown RBP12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 TACR3P29371 465 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 CCKARP32238 428 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 OR2B6P58173 313 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 SLC35A1P78382 337 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 PDK3Q15120 406 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 RGNQ15493 299 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 AGKQ53H12 422 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 RNF220Q5VTB9 566 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 TFAP2EQ6VUC0 442 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 KRT73Q86Y46 540 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 BBS10Q8TAM1 723 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 CKAP2Q8WWK9 683 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 STON2Q8WXE9 905 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 AURKBQ96GD4 344 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 TMEM19Q96HH6 336 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 PSD2Q9BQI7 771 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 EBF4Q9BQW3 602 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 SPATA5L1Q9BVQ7 753 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 CXXC4Q9H2H0 198 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 SLC6A13Q9NSD5 602 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 MRGBPQ9NV56 204 aa12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 BEX4Q9NWD9 120 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF443Q9Y2A4 671 aaPredicted RBP12.82□□□□□ -0.36
PKNOX1-210ENST00000607049 SMAD9O15198 467 aaKnown RBP12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 ATE1O95260 518 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 C1QCP02747 245 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 OR3A2P47893 321 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 MVDP53602 400 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 EPS8Q12929 822 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 ITGADQ13349 1161 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF311Q5JNZ3 666 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 SFRP5Q5T4F7 317 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 WBP2NLQ6ICG8 309 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 ALKBH2Q6NS38 261 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 C20orf204Q6ZNR8 217 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 Q6ZT83 130 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 NUFIP2Q7Z417 695 aaKnown RBP12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 CXorf67Q86X51 503 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 ADGRG3Q86Y34 549 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 WFDC8Q8IUA0 241 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 UBE2J2Q8N2K1 259 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 CADM2Q8N3J6 435 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 HSD17B8Q92506 261 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 SPATA9Q9BWV2 254 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 PAIP1Q9H074 479 aaKnown RBP12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 UBTD1Q9HAC8 227 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 A4GALTQ9NPC4 353 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 OSGIN1Q9UJX0 560 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 NOSIPQ9Y314 301 aaKnown RBP12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 DSPPQ9NZW4 1301 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 ABCA4P78363 2273 aa12.81□□□□□ -0.36
PKNOX1-210ENST00000607049 AKAP6Q13023 2319 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 DEFB108AA8MXU0 73 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 AP3D1O14617 1153 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 ARHGEF9O43307 516 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 BCAS1O75363 584 aaPredicted RBP12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 ADAP00813 363 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 CAPRIN1Q14444 709 aaKnown RBP12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 ACKR1Q16570 336 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 GTDC1Q4AE62 458 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 LRIF1Q5T3J3 769 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 GCNT6Q5T4J0 391 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF836Q6ZNA1 936 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 VRK2Q86Y07 508 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 GABRG1Q8N1C3 465 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 SLC35B4Q969S0 331 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 S100PBPQ96BU1 408 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 ZNF524Q96C55 264 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 MUCL1Q96DR8 90 aa12.8□□□□□ -0.36
PKNOX1-210ENST00000607049 TAPBPLQ9BX59 468 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms