RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 WSCD1Q658N2 575 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SLC25A25Q6KCM7 469 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 STEAP1BQ6NZ63 245 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 METTL7BQ6UX53 244 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 GCNT7Q6ZNI0 430 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 CCDC80Q76M96 950 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SSX9Q7RTT3 188 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 H2BFWTQ7Z2G1 175 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 MRPL10Q7Z7H8 261 aaKnown RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 FJX1Q86VR8 437 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 RANBP3LQ86VV4 465 aaPredicted RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SERPINA9Q86WD7 417 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 TRIM69Q86WT6 500 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 VRK2Q86Y07 508 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 MICU2Q8IYU8 434 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SYCE1Q8N0S2 351 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 CLEC4FQ8N1N0 589 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 ELMOD1Q8N336 334 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 ARFGAP1Q8N6T3 406 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SDR9C7Q8NEX9 313 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 OR7G2Q8NG99 324 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 HCAR2Q8TDS4 363 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 PAQR8Q8TEZ7 354 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 LRRC15Q8TF66 581 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 PIBF1Q8WXW3 757 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 ANP32BQ92688 251 aaKnown RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 CLDN23Q96B33 292 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 RTP4Q96DX8 246 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SCMH1Q96GD3 660 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 ARL5BQ96KC2 179 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 LURAP1Q96LR2 239 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 C19orf43Q9BQ61 176 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 C20orf24Q9BUV8 137 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 TEKT3Q9BXF9 490 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 CSTL1Q9H114 145 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SLC25A51Q9H1U9 297 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 FNDC4Q9H6D8 234 aaPredicted RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SLC25A19Q9HC21 320 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 POLD4Q9HCU8 107 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 LYRM4Q9HD34 91 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 HIF1ANQ9NWT6 349 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 TUBA8Q9NY65 449 aaPredicted RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 PTTG3PQ9NZH4 202 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 WIPI2Q9Y4P8 454 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 BZW2Q9Y6E2 419 aaKnown RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 NAV2Q8IVL1 2488 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 DMXL2Q8TDJ6 3036 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 BAZ2BQ9UIF8 2168 aaKnown RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGSF9BQ9UPX0 1349 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SPAG17Q6Q759 2223 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 ASPMQ8IZT6 3477 aa3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 ASH1LQ9NR48 2969 aaKnown RBP3.39□□□□□ -1.87
IGHV3-29-201ENST00000604817 SHROOM3Q8TF72 1996 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 PATJQ8NI35 1801 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 F5P12259 2224 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 HELZ2Q9BYK8 2649 aaKnown RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 IGLV5-52A0A0A0MRZ9 124 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 TRBV11-1A0A0K0K1C0 115 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 A0A1B0GVT2 93 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 FRG2CA6NGY1 282 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 FAM74A7A6NL05 159 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 SRRM3A6NNA2 597 aaPredicted RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 IQCF5A8MTL0 148 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 INAFM1C9JVW0 142 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 WWP2O00308 870 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ADAM10O14672 748 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 EIF3HO15372 352 aaKnown RBP eCLIP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 KIAA0513O60268 411 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 N4BP1O75113 896 aaKnown RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 BAG4O95429 457 aaKnown RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 FGF19O95750 216 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 GAPDHP04406 335 aaKnown RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ERCC1P07992 297 aaPredicted RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 FAM157CP0CG43 387 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ADORA3P0DMS8 318 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 MBL2P11226 248 aaPredicted RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ANXA3P12429 323 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 PGCP20142 388 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 EPHA2P29317 976 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 PPP2R1BP30154 601 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 RORAP35398 523 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 RPS9P46781 194 aaKnown RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 SLC7A2P52569 658 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ATP1B3P54709 279 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 MAP3K7CLP57077 242 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 YWHAGP61981 247 aaKnown RBP eCLIP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 EEF1A1P68104 462 aaKnown RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 SSBP2P81877 361 aaPredicted RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 OC90Q02509 493 aaPredicted RBP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 SRSF9Q13242 221 aaKnown RBP eCLIP3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 PEX6Q13608 980 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ITIH4Q14624 930 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 TWIST1Q15672 202 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 QRICH1Q2TAL8 776 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 FAM74A3Q4VXF1 159 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 ASPRV1Q53RT3 343 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 EFHC1Q5JVL4 640 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
IGHV3-29-201ENST00000604817 PXDC1Q5TGL8 231 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms