RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 ARSDP51689 593 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 SLC10A2Q12908 348 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-216ENST00000602557 B3GLCTQ6Y288 498 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 C1orf87Q8N0U7 546 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 RAB39BQ96DA2 213 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 USP22Q9UPT9 525 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 OR1A2Q9Y585 309 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 G3V2L1 256 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 TCAPO15273 167 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 EMP3P54852 163 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 TAS2R38P59533 333 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 PDCD1LG2Q9BQ51 273 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 NMNAT2Q9BZQ4 307 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 LALBAP00709 142 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 CLEC2LP0C7M8 214 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 MRPS10P82664 201 aaKnown RBP8.17□□□□□ -1.1
CSMD1-216ENST00000602557 OGFOD3Q6PK18 319 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 GPR26Q8NDV2 337 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 OR2T11Q8NH01 316 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 INTS12Q96CB8 462 aaKnown RBP8.17□□□□□ -1.1
CSMD1-216ENST00000602557 DEFB126Q9BYW3 111 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 MVB12BQ9H7P6 319 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 SPACA1Q9HBV2 294 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 C2orf42Q9NWW7 574 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 ELAVL3Q14576 367 aaKnown RBP8.17□□□□□ -1.1
CSMD1-216ENST00000602557 SLC35G1Q2M3R5 365 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 PSAPL1Q6NUJ1 521 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF836Q6ZNA1 936 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 OR5AK2Q8NH90 309 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 CHTF18Q8WVB6 975 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 SLCO5A1Q9H2Y9 848 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 SPHK1Q9NYA1 384 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 C20orf202A1L168 122 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 CLDN6P56747 220 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 PAGE3Q5JUK9 113 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 NXPE4Q6UWF7 544 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 NRMQ8IXM6 262 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 KLHDC8BQ8IXV7 354 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 SLC35F3Q8IY50 421 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 CYB561A3Q8NBI2 242 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 OR51D1Q8NGF3 324 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 POFUT1Q9H488 388 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 LRRC37A3O60309 1634 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 UMAD1C9J7I0 102 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 PPP1R3DO95685 299 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 MEOX2P50222 304 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 KIAA0907Q7Z7F0 614 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-216ENST00000602557 RELL2Q8NC24 303 aaPredicted RBP8.17□□□□□ -1.1
CSMD1-216ENST00000602557 DNAJC5Q9H3Z4 198 aa8.17□□□□□ -1.1
CSMD1-216ENST00000602557 A0A1B0GTW7 788 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 FAM227AF5H4B4 570 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 KEAP1Q14145 624 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 NSDHLQ15738 373 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 TAS1R3Q7RTX0 852 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CWH43Q9H720 699 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 TM7SF3Q9NS93 570 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 K7ERQ8 282 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 RPL23AP62750 156 aaKnown RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 TMEM35AQ53FP2 167 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 FAM199XQ6PEV8 388 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 PDZD3Q86UT5 571 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 GLB1L2Q8IW92 636 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 SLC14A1Q13336 389 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 EXOSC2Q13868 293 aaKnown RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF542PQ5EBM4 170 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 PLAC9Q5JTB6 97 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF852Q6ZMS4 543 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 COMMD6Q7Z4G1 85 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 FJX1Q86VR8 437 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 GPR78Q96P69 363 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 STRADBQ9C0K7 418 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CLDN24A6NM45 220 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 HCCSP53701 268 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CCINQ13939 588 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 HNF4GQ14541 408 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 RPE65Q16518 533 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 UGT3A2Q3SY77 523 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 RNF212Q495C1 297 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 RAB6CQ53S08 254 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 WDR92Q96MX6 357 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 RAB6CQ9H0N0 254 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 PIRO00625 290 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 PRSS56P0CW18 603 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 UBL4AP11441 157 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 UBE2IP63279 158 aaKnown RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ZNF761Q86XN6 746 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 TSACCQ96A04 125 aaPredicted RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 HS6ST2Q96MM7 605 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 EXO1Q9UQ84 846 aaKnown RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CORINQ9Y5Q5 1042 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 CSNK1G3Q9Y6M4 447 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 VSTM2BA6NLU5 285 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 FABP4P15090 132 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
CSMD1-216ENST00000602557 TGFBR1P36897 503 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 NLGN4XQ8N0W4 816 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 TRIB3Q96RU7 358 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 NIPSNAP3BQ9BS92 247 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 GPR174Q9BXC1 333 aa8.16□□□□□ -1.1
CSMD1-216ENST00000602557 XYLT2Q9H1B5 865 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms