RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 TCFL5Q9UL49 500 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 CBLCQ9ULV8 474 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ZNF232Q9UNY5 417 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 A0A087WUU8 490 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 FRG2CA6NGY1 282 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 KDM4EB2RXH2 506 aaPredicted RBP10.74□□□□□ -0.69
VRK3-223ENST00000601341 TBX1O43435 398 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 TLX2O43763 284 aaPredicted RBP10.74□□□□□ -0.69
VRK3-223ENST00000601341 PRKYO43930 277 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 OR5F1O95221 314 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 ZIC2O95409 532 aaPredicted RBP10.74□□□□□ -0.69
VRK3-223ENST00000601341 APOA1P02647 267 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 FPR3P25089 353 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 CD82P27701 267 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 STAT5AP42229 794 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 WNT4P56705 351 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 PSPHP78330 225 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 RUNX1T1Q06455 604 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 TPBGQ13641 420 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 GPR68Q15743 365 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 EIPR1Q53HC9 387 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 ZNF311Q5JNZ3 666 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 FAM69BQ5VUD6 431 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 HSDL2Q6YN16 418 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 COMTD1Q86VU5 262 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 C9orf40Q8IXQ3 194 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 POC5Q8NA72 575 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 APCDD1LQ8NCL9 501 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 C17orf47Q8NEP4 570 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 OR4N2Q8NGD1 307 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 OR52I1Q8NGK6 324 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 OR52P1PQ8NH57 321 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 ACOT11Q8WXI4 607 aaPredicted RBP10.74□□□□□ -0.69
VRK3-223ENST00000601341 OSTF1Q92882 214 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 ADIPOR1Q96A54 375 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 NACC2Q96BF6 587 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 ZG16BQ96DA0 208 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 LRR1Q96L50 414 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 CEP19Q96LK0 163 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 GAL3ST4Q96RP7 486 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 WWTR1Q9GZV5 400 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 KRCC1Q9NPI7 259 aaPredicted RBP10.74□□□□□ -0.69
VRK3-223ENST00000601341 ABCB10Q9NRK6 738 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 TAS2R16Q9NYV7 291 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 TVP23BQ9NYZ1 205 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 MRTO4Q9UKD2 239 aaKnown RBP10.74□□□□□ -0.69
VRK3-223ENST00000601341 WDFY3Q8IZQ1 3526 aa10.74□□□□□ -0.69
VRK3-223ENST00000601341 CEP250Q9BV73 2442 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 RAD1O60671 282 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 DBIP07108 87 aaKnown RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 THBS1P07996 1170 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 GALP22466 123 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 FGF9P31371 208 aaPredicted RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 RFX3P48380 749 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 PSMD4P55036 377 aaKnown RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 SLC26A5P58743 744 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 TAS2R41P59536 307 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 RNF4P78317 190 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 ACSM1Q08AH1 577 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 SSPNQ14714 243 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 LARS2Q15031 903 aaKnown RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 NNATQ16517 81 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 FLYWCH1Q4VC44 716 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 MARCH9Q86YJ5 346 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 BCORP1Q8N888 145 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 OR8K3Q8NH51 312 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 PIGXQ8TBF5 258 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 KIAA1143Q96AT1 154 aaPredicted RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 WFDC6Q9BQY6 131 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 ZNF700Q9H0M5 742 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 QRSL1Q9H0R6 528 aaKnown RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 NXF5Q9H1B4 397 aaKnown RBP10.73□□□□□ -0.69
VRK3-223ENST00000601341 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 FBXO34Q9NWN3 711 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 DLL3Q9NYJ7 618 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 IL20Q9NYY1 176 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 HS3ST3B1Q9Y662 390 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 DMXL1Q9Y485 3027 aa10.73□□□□□ -0.69
VRK3-223ENST00000601341 IGHV1-45A0A0A0MS14 117 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.72□□□□□ -0.69
VRK3-223ENST00000601341 TO15178 435 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 SDHBP21912 280 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 OMPP47874 163 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 GAS1P54826 345 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 PCOLCEQ15113 449 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 EXT1Q16394 746 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 SNAPC1Q16533 368 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.72□□□□□ -0.69
VRK3-223ENST00000601341 ACSM5Q6NUN0 579 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 CD200R1LQ6Q8B3 271 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 IGF2-ASQ6U949 168 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 KIRREL2Q6UWL6 708 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 RRM2BQ7LG56 351 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 HMGN2P46Q86SG4 172 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 VRK2Q86Y07 508 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 SNX29P2Q8IUI4 249 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 ZSCAN1Q8NBB4 408 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 POGLUT1Q8NBL1 392 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 OR5L2Q8NGL0 311 aa10.72□□□□□ -0.69
VRK3-223ENST00000601341 NUBPLQ8TB37 319 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms