RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 OR4Q3Q8NH05 313 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ZNF563Q8TA94 476 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 FGF11Q92914 225 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ARSGQ96EG1 525 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 PLEKHA8Q96JA3 519 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 LRR1Q96L50 414 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ZNF582Q96NG8 517 aaPredicted RBP18.31■□□□□ 0.52
PNKP-214ENST00000600573 ELOA3DA6NLF2 546 aaPredicted RBP18.31■□□□□ 0.52
PNKP-214ENST00000600573 SOCS6O14544 535 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 CDC42EP2O14613 210 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 CDC40O60508 579 aaKnown RBP eCLIP18.31■□□□□ 0.52
PNKP-214ENST00000600573 MAKP20794 623 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 MSX1P28360 303 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ZNF117Q03924 483 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 TIGD6Q17RP2 521 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 NDUFAF6Q330K2 333 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ELOA3BQ3SY89 546 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ATG4DQ86TL0 474 aaPredicted RBP18.31■□□□□ 0.52
PNKP-214ENST00000600573 TMPRSS12Q86WS5 348 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ELOA3Q8NG57 546 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 OR2T33Q8NG76 320 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 B4GALNT2Q8NHY0 566 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 TMEM80Q96HE8 168 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 ADAM19Q9H013 955 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 BAIAP2Q9UQB8 552 aa18.31■□□□□ 0.52
PNKP-214ENST00000600573 YARS2Q9Y2Z4 477 aaKnown RBP18.31■□□□□ 0.52
PNKP-214ENST00000600573 CACNA1HO95180 2353 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 KDM4EB2RXH2 506 aaPredicted RBP18.3■□□□□ 0.52
PNKP-214ENST00000600573 KPNA4O00629 521 aaPredicted RBP18.3■□□□□ 0.52
PNKP-214ENST00000600573 PRODHO43272 600 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 PTHP01270 115 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 CSRP1P21291 193 aaKnown RBP18.3■□□□□ 0.52
PNKP-214ENST00000600573 CD82P27701 267 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 GRK5P34947 590 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 TGFBR2P37173 567 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 CCR4P51679 360 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 SLC30A6Q6NXT4 461 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 OPN5Q6U736 354 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 CBLN3Q6UW01 205 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 RTL4Q6ZR62 310 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 ARMC10Q8N2F6 343 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 SGTBQ96EQ0 304 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 SAMD8Q96LT4 415 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 SECISBP2Q96T21 854 aaKnown RBP18.3■□□□□ 0.52
PNKP-214ENST00000600573 MESP1Q9BRJ9 268 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 OR52D1Q9H346 318 aa18.3■□□□□ 0.52
PNKP-214ENST00000600573 MEPEQ9NQ76 525 aaPredicted RBP18.3■□□□□ 0.52
PNKP-214ENST00000600573 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.3■□□□□ 0.52
PNKP-214ENST00000600573 M0R3G1 203 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 TP53I11O14683 189 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 SLC22A1O15245 554 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 SURF4O15260 269 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 HPP00738 406 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 SAGP10523 405 aaPredicted RBP18.29■□□□□ 0.52
PNKP-214ENST00000600573 ITPKBP27987 946 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 HTR3AP46098 478 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 CTF1Q16619 201 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 NTRK2Q16620 822 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 ANKDD1AQ495B1 522 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 C3orf38Q5JPI3 329 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 RNLSQ5VYX0 342 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 DEFB124Q8NES8 71 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 THAP3Q8WTV1 239 aaPredicted RBP18.29■□□□□ 0.52
PNKP-214ENST00000600573 TMEM234Q8WY98 164 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 ATP13A2Q9NQ11 1180 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 C20orf141Q9NUB4 165 aa18.29■□□□□ 0.52
PNKP-214ENST00000600573 PTP4A3O75365 173 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 OR2J2O76002 312 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 BCL10O95999 233 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 FTH1P19P0C7X4 201 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 GP1BBP13224 206 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 CD36P16671 472 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 FBXW4P57775 412 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 CRYZQ08257 329 aaKnown RBP18.28■□□□□ 0.52
PNKP-214ENST00000600573 SNTA1Q13424 505 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 TMEM81Q6P7N7 255 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 SMARCD3Q6STE5 483 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 LYPD8Q6UX82 237 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 BCDIN3DQ7Z5W3 292 aaKnown RBP18.28■□□□□ 0.52
PNKP-214ENST00000600573 LIPHQ8WWY8 451 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 SPACA9Q96E40 222 aaPredicted RBP18.28■□□□□ 0.52
PNKP-214ENST00000600573 RASL10BQ96S79 203 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 RACGAP1Q9H0H5 632 aa18.28■□□□□ 0.52
PNKP-214ENST00000600573 A0A1W2PNU3 283 aaPredicted RBP18.27■□□□□ 0.52
PNKP-214ENST00000600573 M0R082 166 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 OIP5O43482 229 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 TNFSF15O95150 251 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 RAB36O95755 333 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 AQP6Q13520 282 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 DNASE1L3Q13609 305 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 KLHL22Q53GT1 634 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 FAM69BQ5VUD6 431 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 PPP1R32Q7Z5V6 425 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 OAFQ86UD1 273 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 ANKK1Q8NFD2 765 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 OR13C2Q8NGS9 318 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 DUSP19Q8WTR2 217 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 RFKQ969G6 155 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 IP6K3Q96PC2 410 aa18.27■□□□□ 0.52
PNKP-214ENST00000600573 UBQLN3Q9H347 655 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms