RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 DIO2Q92813 273 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 TMBIM1Q969X1 311 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 OMA1Q96E52 524 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 ZFP3Q96NJ6 502 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 G6PC3Q9BUM1 346 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 PCDHAC1Q9H158 963 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 OPN3Q9H1Y3 402 aaPredicted RBP12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 SLCO5A1Q9H2Y9 848 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 MUC13Q9H3R2 512 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 CALML5Q9NZT1 146 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 CNIH4Q9P003 139 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 OR10H1Q9Y4A9 318 aa12.46□□□□□ -0.41
SHKBP1-218ENST00000598907 NINQ8N4C6 2090 aa12.46□□□□□ -0.42
SHKBP1-218ENST00000598907 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 TMEM247A6NEH6 219 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 NPIPB9F8W1W9 429 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 TRIM3O75382 744 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 STX11O75558 287 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 PPM1BO75688 479 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 TNFSF13O75888 250 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 HPNP05981 417 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 FBXO45P0C2W1 286 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 POU2F1P14859 743 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 NQO1P15559 274 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 SRD5A1P18405 259 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 TCN1P20061 433 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 CRYBA2P53672 197 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 NRG3P56975 720 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 CHRNEQ04844 493 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 ETFDHQ16134 617 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 DECR1Q16698 335 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 GPAT3Q53EU6 434 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 GLYATQ6IB77 296 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 FIGNL1Q6PIW4 674 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 C22orf34Q6ZV56 151 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 OLIG3Q7RTU3 272 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 ZAR1Q86SH2 424 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 YRDCQ86U90 279 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 CNEP1R1Q8N9A8 125 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 OR52E4Q8NGH9 312 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 BBS10Q8TAM1 723 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 ZPLD1Q8TCW7 415 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 RNF138Q8WVD3 245 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 GTPBP3Q969Y2 492 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 ASB9Q96DX5 294 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 TRMT61AQ96FX7 289 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 GNRHR2Q96P88 292 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 GORASP2Q9H8Y8 452 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 ACTR3BQ9P1U1 418 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 LPAR3Q9UBY5 353 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 EGFL7Q9UHF1 273 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 MRTO4Q9UKD2 239 aaKnown RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 POMPQ9Y244 141 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 ANGPT4Q9Y264 503 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 C15orf41Q9Y2V0 281 aa12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 GPC6Q9Y625 555 aaPredicted RBP12.45□□□□□ -0.42
SHKBP1-218ENST00000598907 A0A1W2PNV4 684 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 CFAP73A6NFT4 308 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 OR6C70A6NIJ9 312 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 CXCR6O00574 342 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 HS3ST1O14792 307 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 MSTNO14793 375 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 KIAA0513O60268 411 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 ETS2P15036 469 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF16P17020 682 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 RPS4Y1P22090 263 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 CFPP27918 469 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 KDELR2P33947 212 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 PSMD4P55036 377 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 SIRPAP78324 504 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 PLCXD2Q0VAA5 305 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 NTRK2Q16620 822 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 NHSL2Q5HYW2 709 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 RPS26P11Q5JNZ5 115 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 INTS11Q5TA45 600 aaKnown RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 LCN8Q6JVE9 175 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 VWA1Q6PCB0 445 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 C12orf54Q6X4T0 127 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF771Q7L3S4 317 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 GRAMD2AQ8IUY3 354 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 PRR22Q8IZ63 422 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF619Q8N2I2 560 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 ZNF611Q8N823 705 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 OIT3Q8WWZ8 545 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 HGDQ93099 445 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 ZG16BQ96DA0 208 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 RSPO3Q9BXY4 272 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 MTHFD2LQ9H903 347 aaPredicted RBP12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 MAGEL2Q9UJ55 1249 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 KCNE5Q9UJ90 142 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 MKLN1Q9UL63 735 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 WDR45Q9Y484 360 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 SNX13Q9Y5W8 968 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 MED12Q93074 2177 aa12.44□□□□□ -0.42
SHKBP1-218ENST00000598907 TMEM229AB2RXF0 380 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 C5orf58C9J3I9 102 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 ARPC2O15144 300 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 ABCB7O75027 752 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 NDUFS7O75251 213 aa12.43□□□□□ -0.42
SHKBP1-218ENST00000598907 UGT2B11O75310 529 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms